Girardinichthys multiradiatus (darkedged splitfin): 124884727
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Entry
124884727 CDS
T08099
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124884727 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124884727 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
124884727 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmu04147
]
124884727 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124884727 (col4a4)
Exosome [BR:
gmu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
124884727 (col4a4)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124884727 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
124884727
NCBI-ProteinID:
XP_047248730
LinkDB
All DBs
Position
18:complement(50271765..50312749)
Genome browser
AA seq
1641 aa
AA seq
DB search
MEESLDGAGGEVGDPTEPCDGRDCTTCQCFPAKGARGAPGPLGPQGSWGPPGFPGAQGVP
GQKGDRGDEGPIGPPGVKGDIVRKHRHSWVSRFRRSPGKKPGLYQPVESSNRVTQAKLEV
LVFQVWMDVTEPEETPGILGFQENRELMENRVFQVRKDFQEIHPSTLSSSLEFLVKRVSQ
DQLDLQVQQDRMETMVYLVYLVQGVPLSLISADVCVSQGEKGRLVPGPKGDEGDQGLQGP
PGPFEYIESPDDYYLKGEKGLDGPPGIKGEKGIVGFPGLRGDSGRPGPPGEKGVQGMKGT
QGLPGLIGQEGLKGIVGDPGPKGLPQINDIILTGDVGDPGNAGQRGPPGEIGPRGMPGPP
GFPGRSTSGLVGIDGQKGEPGSKGDRGDPGQILQEVNPGKPGKPGQPGQRGPKGQPGIPG
TYCASGIPGMFGDPGERGFPGASGFLGIKGDLGTCSCGPPLELRGPPGPVGEAGNAGLPG
TSGAKGPRGERGSPGDRGVEGAEGLVGFSGVKGFKGQKGDFIVVDIKGEKGKKGNLGPVG
GPGFSGRNGLCGAPGAPGNPGPEGENFSGFSGDRGFQGFPGPKGFLGPPGPRGDGVDGVV
GERGLPGDLGFTGFPGPKGQKGVQGDTPRCLPQNPGSLGEKGDPGIPGFPGPPGPSGYQG
IRGSDGPKGDMGLRALPGPPGDRGPPGSVGDTGEEGIQGFSRDGSPGSRGPPGPPGIPGP
RGDDHYGSPGSTGLPGQLGFPGPKGALGPPGNQGAPGVLGLPGDPGAKGQKGDDGAQGQT
GPPGLTPDQCVAGKSGEMGFQGPQGPPGHPGCSGPKGDTGDRGLPATSLKGKAGEIGVLG
FPGKRGPQGPQGAFGDLGLPGLFGQRGLIGPQGLEGGPGVPGKKGLPGDQGRTGERGPRG
QDGAQGCVGPKGQKGHKGYPGTPGDVNIITTKGPPGLQGPAGITGFSAPRGSKGVRGATG
NPGDPGFSGPPGLRGPQGPQGPLGKEGPPGLPGYKGHKGYIGFPGQPGEPGDPGYPGIPG
NPGNSGCRGPKGDRGESLCSPGPPGDKGHSGYWGLDGLAGPQGDPGPPGYIGPPGQKGCK
GHRGLPGCPGESGVVGPPGLSGRQGAPGPSGGSGADGEPGPVGYPGCKGVPGPPGLHGLD
GLNGRKGAMGIKGFCEDGYKGDRGPQGNKGPQGPQGPCGTSQKGPPGPKGPQGPIGLPGV
SGPPGPPGDDCKDPTPGPSGDPGYVGPDGDPGCHGEIGDPGPNPSICGDIGDNGDPGCQG
PKGPSGCQGPTGPKGFPGNQGPKGLKGEQGLLGVPGQWGLRGPPGYRGPKGQKGPTGSVG
LKGQKGQILSLDPPLPAMGPEGPPGPPGPKGQEGLMGETGPRGLEGVKGNRGEDGLTGPV
GQKGDPGARGEPGLPGEDGVVGEKGDPGPVGNEGPPGPTLNLKLGFLLVKHSQTEEVPSC
PSTMQKLWTGYSLLYLEGQERAYSQDLGQAGSCVPVFSTMPFSVCGTRNCQYARRNDKAY
WLATIAKPPKKPFSGIAIKNHISRCVVCEAPSAAVAMHDPSSKELPGCPPNWTSLWTGYS
FIMFSGGGDEGGGLSLMSPGSCLSRFKAQPFLECQGARGTCHFFANFYSFWLTTFNSTES
TLTDSEQQREHVARCRVCIRM
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtcattagatggagcgggtggtgaggtgggtgacccgacggagccgtgtgat
ggccgggactgtaccacctgccagtgttttccagccaaaggagcgaggggtgccccaggt
cctttgggtccgcagggctcttgggggcccccaggcttcccaggtgctcagggagttcca
ggacaaaagggtgatagaggagatgaggggccgataggacctcctggcgtaaaaggagat
attgtgaggaagcatcggcattcctgggtttccaggtttagacggagtcccggtaagaag
ccgggcctctatcagcctgttgaatcttctaacagggtcacccaggccaagctggaggtc
ctggtcttccaggtttggatggatgtaacggaaccagaggaaactccgggaatcctgggc
ttccaggagaacagggagctgatggagaaccgggttttccaggtccgaaaggatttccag
gagattcatccgtctactttatccagttccctggagttcctggtgaagagggtctcccag
gaccaactggacctgcaggtccagcaggatcggatggaaacaatggtttacctggtctac
ctggttcaaggggtccccctcagtctgatctctgctgatgtttgtgtgtctcagggagaa
aaaggacgattagtgccgggaccgaaaggagacgagggagaccaaggccttcaggggcct
ccggggccctttgagtatattgagtctccagatgactactacctcaaaggggaaaagggt
ttggacggaccccctggcattaaaggagagaaggggattgttggatttccaggactgaga
ggggattctggtcgacccggccctcctggagagaaaggtgttcaggggatgaagggaacc
cagggtctccccggactgataggtcaagaaggtcttaagggcattgttggcgatccgggc
cctaaaggtctccctcagataaatgacattattctcacaggtgatgtcggggaccctggg
aacgctggacagaggggtcctcctggtgaaatagggcccagggggatgcctggccctcca
ggattcccaggaagatcaacatcaggactagtaggtattgatggtcagaagggagaacct
gggtccaaaggtgacagaggagaccctggtcagattttacaagaagtgaatcctggaaaa
cctggaaaaccaggacagccgggacagcgagggcctaagggacagccgggtattccagga
acatattgtgcttccgggatcccaggaatgtttggagatccgggtgaacgagggtttcca
ggagcatcaggttttctggggattaaaggtgatcttggcacatgttcatgcggccctcca
cttgaactgaggggccctcctggtcctgtaggggaagcagggaatgcagggttaccagga
acctcaggagccaaaggcccaagaggagagagaggttcacctggagacagaggagtggag
ggtgctgagggcttggttggattttcgggtgtcaaaggctttaaaggacagaaaggagat
ttcatagtggtagacattaaaggtgaaaagggaaaaaagggcaacttgggccctgtaggt
ggaccaggattctcagggagaaatggactctgtggggccccaggagcccctggaaaccct
ggacctgagggggaaaatttcagtggtttttctggagacagaggcttccaaggatttcca
ggaccaaaaggatttttaggaccaccgggtcccagaggagacggtgtggacggggttgtt
ggagagcgtgggcttcctggagacctgggatttacagggtttcctgggccaaaagggcaa
aagggagttcaaggtgacactcctcgctgtttgcctcaaaaccctggttcccttggtgag
aagggagaccctggaataccaggtttcccaggtcctccaggtcccagcggttatcaaggc
atccgagggtcggatgggcctaaaggagacatgggactgagagcacttccaggaccaccc
ggggaccgagggcctccaggttctgttggagatactggagaagagggaatccagggtttt
agccgtgatggaagtccaggctctcgaggacccccgggcccacctggtatccccggaccg
aggggtgatgatcactacggctccccaggatccacgggcttgcctggacaactgggcttt
ccaggacctaaaggagcccttggccccccaggcaatcagggtgcaccaggcgtcctgggt
cttcctggggaccctggagcgaagggacagaaaggagatgatggggcccaaggtcaaaca
ggccccccagggctcacaccggaccaatgtgttgcaggaaagtctggtgaaatgggcttc
cagggacctcagggacctcctggccatccaggttgctcaggcccaaaaggtgacaccggg
gacagaggtcttccagctactagtcttaaaggcaaggctggagaaattggagttctaggt
tttcctgggaaacgggggcctcaggggccccaaggtgcttttggagaccttggtctgcca
gggctctttggtcaaagaggtctgattgggccccagggccttgaaggaggaccaggtgtt
ccaggaaaaaaaggcctccctggagaccaaggcaggaccggagagcggggccccagggga
caagatggagctcagggttgtgttggcccgaagggacaaaaaggtcataaaggctaccca
ggtactccaggggacgtcaacatcattaccacaaagggcccacctggactacagggccct
gctggcatcaccggattctcggcaccacgaggaagtaaaggtgtgcgtggtgctacaggt
aaccctggagatccgggcttcagtggacctccaggtcttaggggaccccagggaccccaa
gggcctctgggcaaagaagggccacctggacttcctggatataagggacataaaggatac
attggctttcctgggcagcctggagaaccgggagacccaggatatcctggaatacctgga
aatcctggtaattcaggatgtcgtggacctaaaggtgatagaggagagtctctctgtagt
cctggtccacctggagataagggacattctggatactggggtcttgatgggcttgctggc
cctcagggagatcctggaccaccaggctatattgggccaccggggcagaaaggatgtaaa
ggacacagaggccttcctggatgccctggggaatcaggtgtggttggtccaccagggctc
agcggtcggcagggggctccaggtccttctggtggatcaggagctgatggtgaacctgga
ccagtgggttacccaggttgcaaaggagttcctgggccaccaggacttcatggactggat
ggactaaatggacgaaaaggtgccatggggatcaaaggtttttgtgaggatggttataaa
ggcgatagaggtcctcagggaaataaaggtcctcaaggtccacaaggtccctgtggtacg
tcccagaaaggaccaccaggacccaaaggcccccagggacccatagggcttccaggtgtt
tcaggaccaccaggtccacctggagatgactgtaaagacccaactccaggaccaagtggg
gatcctggttatgtaggcccagatggagatccaggttgtcatggtgaaattggagatcca
ggtccaaacccttctatctgtggggatattggagacaatggtgatccaggatgccaaggg
ccaaaaggaccttcgggatgtcaggggccaacaggaccaaaaggcttccctggaaaccaa
gggccaaaaggtttgaaaggagagcagggtctgctgggagtacctggacaatggggtctg
aggggtccacctggataccgagggcctaaaggacagaaagggccaacaggatcagtgggt
ctgaaggggcagaaaggacaaatcttgtcgttggacccacccctgccagcgatgggtcct
gaaggaccacctggtccccctggtcctaaaggacaagagggcctgatgggagaaactggt
cccagagggctagagggggtaaaggggaatcgtggggaagatggactaacaggacctgtg
gggcaaaaaggtgacccaggagccaggggagagccaggtctgcctggagaggacggagtg
gtgggagaaaaaggagatccgggtcccgtgggtaacgaaggtcctcctggaccgacccta
aacttgaaacttggtttcctgctggtgaagcacagccaaacagaggaggttccaagttgc
ccctcaaccatgcagaagctttggaccggatacagtctgctgtacctggagggccaggag
agagcgtactcccaggatctgggtcaggctggatcctgtgttcctgtgttctccaccatg
ccattctccgtctgcggcaccagaaactgtcagtacgctcgtcgaaacgataaagcctat
tggttggcaacgatagcgaagcctccaaaaaaacccttttctgggatcgccatcaagaac
cacatcagccgctgtgtggtgtgtgaagctccatctgctgctgtggcgatgcatgacccg
agctccaaagaactaccagggtgtcctcccaattggacatctctgtggaccgggtactcc
ttcattatgttctcaggtggaggtgatgagggtggcggcctctctctaatgtcaccgggc
agctgtttgtcacggttcaaagctcagcccttcctggagtgtcagggtgctcgaggaacc
tgccactttttcgccaacttctacagcttctggctgaccaccttcaacagcacagagagc
acgctgaccgactccgagcagcagagggagcacgtggccaggtgtcgggtctgcatcagg
atgtga
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