KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124884751
Entry
124884751         CDS       T08099                                 
Symbol
col4a3
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510  Focal adhesion
gmu04512  ECM-receptor interaction
gmu04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    124884751 (col4a3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124884751 (col4a3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124884751 (col4a3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmu04147]
    124884751 (col4a3)
   00536 Glycosaminoglycan binding proteins [BR:gmu00536]
    124884751 (col4a3)
Exosome [BR:gmu04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   124884751 (col4a3)
Glycosaminoglycan binding proteins [BR:gmu00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   124884751 (col4a3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 124884751
NCBI-ProteinID: XP_047248752
LinkDB
Position
18:50334951..50401484
AA seq 1670 aa
MESPAVRGRITTLLVQILWLCSLLPLEHAKLVCHCTGKSLCHCDGVKGQKGQPGYIGYPG
FPGVTGFPGNEGNQGSPGEKGNRGKAGIPGIKGSRGLPGTPGFPGSPGLPGIPGLEGPMG
RPGVPGCNGTKGEAAYPGFPGVTGPPGPRGPQGPRGMKGDSFVFPAQQEKKGATGPQGPK
GKKGERGYGGEIGPPGPAGPFGLPGNPGLPGNQGEKGQEGSSPTSPGPQGLKGERGPPGI
PGKQGIKLYVEGPKELKGEPGVEGQKGCHGSPGVPGKPGIKGEKGERGEPGFLGKPGKQG
YPGELGQQGAPGNIGFIGLPGIDGTSGEKGNRGPPGLPGEAIYNPIYLKGQQGVPGPRGP
PGVPGFQGLIGFPGLKGESGVGRNGPPGSHGPPGSLGPRGEPGVPGPVITGPPGLTGSPG
VPGAEGEQGEPGLPNFVMEGTGPLGAKGSKGLIGLPGLRGAVGHKGQKGELCTVCRFEYG
LPGPQGQPGEPGQSGLPGSAGFTGPAGDKGVKGIVGPPGPQGFFGFPGLPGTQGPAGEPG
VMTRLGQKGEDGDRGDPGPQGQEGKDGYPGTPGLKGVQGQKGNLGPQGPKGDRGLFGTTG
LRGLTGQMGSTGQLGVGAPGSPGAKGAKGLLGKPGEPGPPGEKGSQGEIQTFPGDPGQKG
DKGLFGITGSRGMTGPPGPKGILGPKGEKGLEGLSFQGIRGTTGLKGDKGSRGAPGFPNY
GSKGREGPWGPPGTIGQKGDRGFGEPGEEGQQGSPGKDGCVGPPGVPGLPGPEGVQGPPG
EDGLPGTKGHCGLDGVPGPIGLNGCCYPGAPGPQGVQGPTGFIGFTGIMGPAGLKGDPGV
QGNGTPGPKGLKGQQGSDGAPGRVGARGLKGLRGKTGESGSPGLRGDTGLPGPIGCPGAD
GKPGQSGEPGPTGQKGTDGSRGSQGPPGNPGDKGEIGPKGVPTNIMLSGNPGDPGIPGPR
GLTGEKGQRGPPGPQGPYGINGNPGCPGPQGLPGDPGRDGQKGHPGCNGQPGDKGLMGRP
GCQGEKGAKGTCGVPGLDGTPGQTGAKGIKGEPSPVGPGVKGCPGEKGNPGTPGCPGPKG
PPGPPGNVGPPGTFGPCGPKGPTGPPGDRGPPGSAGEKGCDGPPGKRGPPGSPGIPGYKG
SPGIPGADGPKGSQGKDGIPGSDGEKGAMGSCTPGSKGETGGKGLPGCTGEKGPPGPYGP
LGPCGPAGNPGCPGLPGFPGSPGCAGRKGVCIDGMKGDKGCPGPQGPKGPPGCKGPPGPP
GPGYKGHKGRKGEPGPTGPAGPPGHHGPPGKAGPGGLPGLPGEKGCQGPVGEKGSVGMEG
VKGQPGNPGPSGRRGRCGRPGPKGRDGRPTEVVSPGDRGEMGDPGDVGKKGHAGSPGAKG
PDGLKGTAGETGQRGQHGGYGLKGEDGDKGGVGRKGENGAKGQIGAKGPRGAQGERGVPS
GMNGFLFTRHSQDRIIPQCPPGSSFVFNGYSLLFINGYSRAHGQDLGTVGSCLQRFSTLP
FLICEIAGECRYAERNDYSYWLSNIRDPQMQKQTSTDQEMLQSKISRCSVCEASANVIAV
HSQTTEIPNCPSSWTPLWEGYSFVMETGLGAEGSGQPLVSPGSCLEKFHKMPFIECNGNP
GTCKYDSSHYSYWLAALNKTDMFGKPGNWSIPGHISENRISRCQVCMKQM
NT seq 5013 nt   +upstreamnt  +downstreamnt
atggagtctcctgctgtgagagggaggatcaccaccctgctggtccagatcctgtggctc
tgctcccttttacctctggaacacgccaaactggtctgtcactgcaccgggaagtccctc
tgtcactgtgatggggtcaaaggccagaagggacaacctggatacatcggataccctgga
tttccaggagtaacaggatttcctgggaacgaaggtaatcagggctcacctggagaaaag
ggtaatcggggaaaagcaggaattccaggaattaagggatctcggggtcttccaggaaca
ccaggttttccaggatctccaggactcccaggaatccctgggcttgaaggaccaatgggc
cgaccaggagtcccaggatgcaacgggacaaaaggggaggctgcctacccagggttccca
ggggttacaggaccacctggaccacgaggaccccaggggccacgagggatgaagggagac
tcgtttgtgttccccgctcagcaggaaaaaaaaggagcaacaggaccacaagggccaaag
ggcaaaaaaggggaacgtggatatggaggagaaataggcccaccaggaccagcaggacca
tttggacttcctggaaatccagggctgccaggaaatcaaggagaaaagggtcaagaaggg
tccagtccaacgagccccggtccacaaggtctaaagggtgagcgtggacctccaggaatc
cccggaaagcagggaatcaaactgtacgttgaaggacccaaagagctgaagggagaacca
ggtgtagaaggacagaaaggttgccatggatctcctggtgtcccagggaaacctgggatt
aaaggagagaagggcgagagaggtgaacctggcttcctgggtaaaccagggaagcaggga
tatccaggagagctcggacagcagggagcccccgggaacattggcttcatcggtcttcct
ggtattgatggtacctcgggagaaaaaggaaatcgaggtcccccaggtctcccaggagag
gcgatctataatcccatatatctgaaaggccagcaaggtgtccctgggccccgtggaccc
ccaggagtccctggatttcaaggactgattgggtttcccgggctgaagggcgagtcaggt
gtgggtcgcaatggaccaccaggctcccatggaccacctggctcattgggtcccagagga
gaacctggagtgccagggccagtaattacaggacctccaggactgaccggatccccaggg
gttcctggagctgaaggagaacaaggagaaccaggattaccaaattttgtgatggaggga
actggtcctctaggagccaaaggttcaaaaggcctgataggacttcctggactgagaggg
gcggttggtcataagggtcagaaaggggagctttgtacagtttgtcgttttgagtatggc
cttcctggacctcagggacagccaggggagcctggtcaaagcgggttgccaggttcagct
ggttttacggggcctgcaggtgataaaggtgtcaaaggtattgtaggaccaccaggacca
cagggtttctttggttttcccggcctcccggggacccaaggacctgcaggtgagccagga
gttatgactaggctggggcagaagggtgaggatggggacaggggggatcctgggccacag
ggacaggaagggaaggatggatatccaggaacaccgggtctgaaaggtgttcaaggacaa
aaaggaaacctgggacctcaagggcccaaaggtgacagggggctatttggcaccacaggt
ctcagaggactgactgggcagatggggtctacaggacaacttggagttggggctccagga
tctccaggggccaaaggagctaagggactcctgggaaagcctggagaacctggacctcca
ggggaaaaaggttctcaaggggaaatccaaacctttccaggagatccaggccagaagggc
gataaaggtttatttgggatcactgggtccagaggtatgacaggacctccaggtcctaaa
ggaattttggggccaaagggcgaaaagggacttgagggtttatctttccaggggatccga
ggcaccacagggttaaagggagacaagggttccagaggagcgccaggttttcccaattat
ggcagcaagggacgagaggggccatggggccccccagggaccattggccagaagggggac
cgaggttttggtgaaccaggtgaggagggtcaacagggctctccgggaaaagatggctgt
gtgggaccaccaggagttcctggacttccaggaccagagggagttcagggacctccagga
gaagatggtcttccagggacaaaaggtcactgtggcctggatggtgtacctggtcctatt
ggtctgaatgggtgctgttaccccggagctccaggacctcagggagtgcaaggtccaaca
ggttttatcgggtttactggaatcatgggaccagctggtctgaaaggagatcccggggtc
caaggcaatggaacccctggacctaagggtctaaaagggcaacaaggatctgatggagct
ccagggagggttggagcaaggggactgaaaggcctgagagggaagactggggagtctggg
agcccagggctgagaggggacacgggtctcccaggaccaattgggtgtccaggagcagac
ggaaaaccaggacaatccggggaaccgggaccaacaggtcagaagggtacagacgggtca
aggggttctcaggggcctccaggcaatcctggagacaaaggggaaattggaccaaaaggg
gttccgacaaacattatgctatcaggaaatcctggagaccctggaatcccaggtcccaga
ggtcttactggtgaaaaaggacaaaggggccccccaggtcctcaagggccatatgggata
aatggaaatcctggatgcccagggccacaaggacttcctggagatccaggtagagatgga
cagaaaggtcatcctggttgcaacggacaaccaggtgacaagggacttatggggagacca
ggttgtcagggtgaaaagggtgcaaagggaacttgtggcgttcctggtttagatggaact
ccaggacaaactggagccaaaggtattaaaggagaaccaagtccagttggaccaggagtt
aaaggctgtccaggagagaaggggaatccaggaactccaggatgtccaggtccaaaagga
ccaccaggaccacctggaaatgttggtcctccaggaacatttggcccttgtggacctaag
ggacctactggaccacctggagacagaggtcctcctgggagtgcaggtgagaagggttgt
gatggccctcccgggaaacgtggacctcctggatctcctggaatcccaggatacaagggg
tctcctgggattcctggtgcagatgggcccaaaggaagccagggaaaggatgggatacct
ggatctgatggagaaaagggagctatgggatcatgtacacctggatctaagggagaaaca
ggaggaaaaggtctacctggatgcacaggggagaagggccctcctggtccctatgggcct
cttggtccatgtggtcctgcaggaaacccaggttgcccaggtcttcctggattccctggt
tctcctggatgtgctggaagaaagggagtatgcattgatggaatgaagggagataaagga
tgccctggacctcaaggacccaaaggcccacctggctgtaaaggtcctcctggtcctcca
ggtcctggttacaaaggtcacaaaggaagaaaaggagaaccaggtcccacaggaccagct
ggaccacctggtcaccatggtcctcctggaaaggcaggtcctggtggactgcctggactt
cctggagaaaaaggctgccaaggacccgttggagaaaaaggatctgttggtatggaaggg
gtgaaaggacaaccaggtaaccctggcccaagtggccgtagaggacgatgtggaagacca
ggaccaaaagggagggatggaagacctactgaggtggtgtcacctggagaccgtggtgaa
atgggagacccgggagatgtgggtaaaaaaggacacgcgggtagccccggagcaaaagga
cctgatggcctgaaaggcactgctggagaaacaggtcagaggggacaacatggtggttat
ggactgaaaggagaagatggagacaaaggaggagtcggaagaaaaggtgagaacggtgca
aaaggccaaataggagctaaaggtcctcgcggtgcacaaggtgaaaggggtgtcccttct
gggatgaacggcttcctgttcaccagacacagccaggatcgcattatcccacaatgtcct
ccaggatcttccttcgttttcaacggatactctctgctcttcatcaacggctacagccgc
gctcacggacaggacctgggtacagtaggtagctgtctacagcggttcagcaccttaccc
ttcctgatctgtgagattgcgggagaatgtcgatatgctgagcgaaacgactattcctac
tggctttccaacatcagggaccctcagatgcaaaagcagacaagcaccgatcaggagatg
ctgcagtccaaaatcagcaggtgttctgtgtgtgaggccagtgccaacgtgatcgctgtc
cacagccagaccactgagattccaaactgcccttctagctggacacctctctgggaagga
tattccttcgtaatggaaacaggtttaggggctgagggctctggtcagcctctggtttca
cccggatcctgcctggaaaaattccataaaatgccctttatcgagtgtaacggaaaccca
ggaacctgcaaatatgacagcagccactacagctactggctggctgctctgaacaagaca
gatatgtttgggaaaccaggaaattggagcattccaggacacatttcagaaaacagaatc
agccgctgtcaagtctgcatgaagcagatgtga

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