Girardinichthys multiradiatus (darkedged splitfin): 124884754
Help
Entry
124884754 CDS
T08099
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124884754 (brip1)
03460 Fanconi anemia pathway
124884754 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124884754 (brip1)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
124884754 (brip1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124884754 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
124884754 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
124884754
NCBI-ProteinID:
XP_047248754
LinkDB
All DBs
Position
18:complement(1994910..2049883)
Genome browser
AA seq
1203 aa
AA seq
DB search
MAASPVEYTIGGVKVHFPCKAYPSQLAMMNSIMRGLNYGQHCLLESPTGSGKSLALLCSA
LGWQQAQHAKQKEGGGHVGDKGQSEKNLGDCKKSESPTRCSCVCHSNADRAAVQPDGLDK
ERGQPLHIASEHVPSPGESQAKKPSLASRLSEKVQTSLDSDCEKDEDFRPDRKRLRTAGF
KSQKRQHTQQGVIFIDDEPELEKETSDPQSWRTASSNQAAGLSSSCSASQPCSRCPCASA
KDMLKDKDGRKKIPKIFFGTRTHKQITQIAHELKRTVYSGVHMTILSSRDHTCVNADVAP
HFNRNERCKDLLEAKDGRSCRYYHGVQRMREQHTLQRVHGLREAWDIEDLVTLGKRLRAC
SYYAARELMQGASIIFCPYNYLLDPMIRESMEIDLAGQILVLDEAHNIEDCARESASYAL
ELATLQSSRDELDGMVNSNIRRSKHEPLRDFCYVLINWIQESQELLSERGFESACKVWSG
KDTLSIFHSLGITADTFSNMKQNLASVLEKEERVGVVNGKEDMVLVPTIGSSTATVLKNL
FMVLDYLYRDNRRFAEDYRVALQRSYTWTNQVPPDVPDAQGFLVRFRARHRQSIRVKREV
LTLSFWCLNPAVAFSDLSATVHSIVLTSGTLSPMASFSSELGVKFTIQLEANHVINKSQV
WVGTVGAGPQGQKLCATFQHTETYTFQDEVGALLLHVCQVMSKGVLCFLPSYKMLDKLRM
RWLDTGLWEKLEQKKTVVTELRGGGKGDFDELLQTYYDAIKYCEGRDGALLIAVCRGKVS
EGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGHRWYEIQAYRALN
QALGRCIRHRNDWGALILVDDRYKSNPNKYITGLSKWVRQLVQHHNTFNNAMQSLAAFSQ
VQQKVEVAPVDSLTHSSSDMSSQSPLSVLVERQGVSAEPEPQRSGLCDRPPNPQQNTSTQ
VKTEQNNTAEPRKTLQSAPARQLTAQASYHIFTFKPTKTNFKKPIFKVNPPKSSNQPVGL
QISSPPVNTETLCPGQETGNCENTVEPNNLAPGVSTVPTPPSFESESPVPANTSEDESVF
YTPELFEDERDEGRPHKENPVSPPRVGAGTESSALPSEQLVGSEHAQGLATTFDGQNAVS
VSTQSTELTQGQKEGIRGWQLSEKGEEDVTQSRQKGSRLHRLSRSRQRIRFSQTGNHQPG
HSE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctctcctgtggagtacaccatcggcggagtgaaggtccacttcccctgcaag
gcttacccatcccagctagccatgatgaactcaatcatgcgagggttaaactacggacag
cactgtttgctggagagtcccacaggcagtggcaaaagtctggccttgctctgctctgct
ctgggctggcagcaagcccaacatgctaaacagaaagaaggaggaggtcatgttggggac
aaaggtcagtcagagaaaaatttgggcgactgcaagaagtcagaatctccaactcgctgt
tcctgtgtgtgccacagcaacgctgatagagcagcagtccagcctgatggtttggacaaa
gagagaggccagccattgcacatagcatcagaacatgtgccatcgccaggggagtcacaa
gccaagaaaccatctttagcatctcgtctgtcagagaaagtccaaacgtctcttgactca
gactgcgagaaagatgaggacttcagaccagacaggaagcgcctccgtactgcagggttt
aagagccagaaaaggcagcacacacaacaaggggtcatattcatagatgatgagcctgag
ctggagaaggaaacatctgatcctcagagttggagaacagcatcaagcaaccaggctgct
ggtttgtcctcatcatgcagtgcctctcaaccctgctcccgctgcccatgtgcatcagcc
aaagacatgttgaaggacaaagatggcagaaagaagattccaaagattttttttggcaca
cggacccataaacagataactcagattgctcatgagctgaagcgcaccgtttactccggc
gtacacatgaccatcctatcgagccgagatcacacgtgtgtcaacgcagatgtggcgcct
catttcaaccgcaacgagcgctgcaaagatctgctggaggccaaagatggaaggtcgtgc
aggtactaccacggtgtacaaaggatgcgggagcagcacacgctccagcgggtccatggg
ctgcgtgaagcttgggacatcgaagacctggtcactctagggaaaaggcttcgtgcttgc
tcttactacgctgctcgggaacttatgcagggtgcctctattatcttttgtccgtacaac
tacctgctggatccaatgatcagagagagtatggagattgacctggcaggccagatcttg
gtgctggatgaggcccataacattgaggactgtgcaagggaaagtgccagctacgcccta
gagctggccaccctgcagtcatccagagatgaactggacggcatggtcaacagtaacatt
agacgctccaagcacgagcctctcagggacttctgttatgttctaatcaactggatccaa
gagagccaagagctgttgtctgaacgtggatttgagagtgcctgcaaagtctggagtgga
aaggatacactgagtattttccacagtttgggcatcacagctgacaccttcagtaacatg
aagcaaaacctggcatctgtgttggagaaggaggagcgtgttggtgtggttaatggtaag
gaggacatggtgctggtcccaaccatcggctcatccacagccactgtactgaaaaacctc
ttcatggtgttggattatctctatagggacaaccgccggtttgctgaggactaccgcgta
gcattgcagaggagctacacctggacgaatcaggtcccacctgacgtccctgatgcccaa
ggctttttggtccggttccgcgcccgacaccgtcaaagcatccgggtcaagagggaggtc
ttgacgctgagtttttggtgtctcaaccctgctgtggctttctctgacctgagtgctaca
gtacacagcattgtgctgacatcaggaaccctgtcacccatggcctcgttctcctctgaa
cttggggtgaagttcaccatccagctagaggccaaccatgtgatcaacaaatcccaggtc
tgggtgggcactgttggtgcaggaccccaaggccaaaaactctgcgccacttttcagcac
acggaaacatacacctttcaggatgaggtgggggctttgctgctccatgtctgccaggtc
atgtccaaaggtgtcctctgctttctgccttcttacaagatgctggacaagctgagaatg
cgttggctcgacactggtctgtgggagaagctggagcaaaagaaaactgtggtcacagag
ctccgcggtggtggcaagggagattttgatgagctgcttcagacgtactacgatgccatc
aaatactgcgaaggaagggacggtgcactgcttattgctgtatgcaggggtaaggtcagt
gaaggcctagactttacagatgacaatgccagggcagtggtcaccattggaattcccttt
ccaaacatcaaagacctccaggtagaactgaagatgaagtacaatgaccagcactgcaag
tccagaggtctccttccgggccatcgctggtatgagattcaagcctacagagctcttaac
caggccctggggagatgcatccggcacaggaatgactggggtgcattgattcttgttgat
gaccgatacaagagcaatccgaataaatacatcacaggtttgtctaaatgggtccgccag
ctcgtccagcatcacaacaccttcaacaatgcaatgcagtctctggcagctttctctcag
gtgcagcagaaggtggaggtggcccccgtggacagtctgacgcacagctcttctgatatg
tcaagccagagtcccttgtcagttcttgttgagagacagggtgttagcgcagaaccagaa
cctcagagatccggtttatgtgacagaccacctaatccccagcagaatacaagcacacaa
gtgaaaactgaacaaaataatacggcagaaccacggaagacactgcaaagcgctccagct
aggcaactcacggctcaggcttcatatcacattttcacctttaaacctacaaaaaccaac
ttcaagaagccgatctttaaagtaaatccaccaaaaagctccaaccagcctgtgggcctg
cagatctcttctccaccagtgaatactgaaacactttgtcctggacaagagactggaaac
tgtgaaaacacagtggagcccaataatctggctccgggggtgtctacagtaccaacccct
cccagctttgaaagtgaatcaccagtaccagcaaacacatctgaggacgagagtgttttc
tataccccagaactttttgaggatgaaagagatgaaggaagaccacacaaagagaaccct
gtgtcacctcccagagttggtgctggtacagagagctcagcccttccatccgaacaactg
gttgggtctgaacatgcccaagggttagccactacttttgatggacaaaatgctgtttca
gtcagtacgcaaagtacagagctaacacagggacagaaagagggcatcagaggatggcag
ctaagtgagaaaggagaggaggacgtgacccagagcagacagaaaggaagtagacttcac
agactgtccaggtccaggcagagaatccgcttcagtcagacaggtaaccaccagcctgga
cactcagagtag
DBGET
integrated database retrieval system
