Girardinichthys multiradiatus (darkedged splitfin): 124884842
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Entry
124884842 CDS
T08099
Symbol
pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124884842 (pnn)
03015 mRNA surveillance pathway
124884842 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124884842 (pnn)
03041 Spliceosome [BR:
gmu03041
]
124884842 (pnn)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124884842 (pnn)
Spliceosome [BR:
gmu03041
]
Complex C
Other components
EJC/TREX
124884842 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
zf-CW
Motif
Other DBs
NCBI-GeneID:
124884842
NCBI-ProteinID:
XP_047248809
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All DBs
Position
19:complement(22735176..22741724)
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AA seq
671 aa
AA seq
DB search
MAVAVRSLQDQLEKAKEGLKHVDDNIRKLTGRDPNESRPGQLRRLSGPMAGLAGGRGRGI
NLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQSSV
VATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNDSSEKLKRRSEIEQK
LEVQAETERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTCHNNHLVKYIRTK
TKPHIFYRPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLSKMELRPRRQPNRDQDGS
SATRMDRPAEGKPAGQVEKRTGKRGESRREEEEDEEEEEEEREKQSIRQQMGGGGGQERE
EGEKEVLNKIEEVGEEVMEVSEEGSKEKGGEEQKEKDEKEASPESEEVEDKLEKEDKGRE
KGVEIDRKQESTEVQEEKTPDIHSEAAVSSQDVPDTSDQPPQSLTAEEPATQSPVTEAAS
QTQEPQTASATPAQNPVTPTQDYIAPEYSFQNPTVEKQQLERKVEEEVLPQKLPDSKELP
VTAPGKEDNRGRGRKKEKEVRKRHSRNSSSSSSSGSSSSGSSSSSSGSSRSSSSSSSSSS
STSSSRSRDSGKRKRRPSDRGRDEKKEARSQHKSGGRDSTERRKRRSEEKKGRPSRSDRE
NKDRDRKDKRR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtgcggagcttgcaggaccagctcgaaaaagccaaagaaggcttgaaa
catgtggacgataatattcgtaaactgactggacgggaccccaatgagtcacgaccgggt
caactccgtcgactcagcggccccatggcaggcctggcaggaggtagaggcagaggaatc
aatcttctcagacgcagtctctcagatatgggaagcggcggcccccctgccaaacaaagg
gacatcgaaggagctctgctgaggctggcaggggatcagagggccaggagagacgtgcga
cacgacagtgatgccgaggatgatgacgatgtcaaaaaaccggcgttgcagtcgtctgtt
gtagctacctctaaggagagaacacgccgagacctcattcaggatcaaaccatggatgag
aagggcaaacagaggaatcggcgcatgtttggcctgctgatggggacgctgcagaaattc
aagcaagaatcgaatgactcttctgagaagctaaagcgacgttcagagattgagcagaag
cttgaagttcaagctgagactgagaggaagaaggtggaaaatgaaaagagagaactgttc
gaggagaggagagccaagcagacagagctgagactgctggaacagaaagtagaattagct
cagctgcaagaggagtggacatgccacaataatcacctggttaaatacatccgcactaaa
accaagcctcatatcttctaccggcctggaaaaatgtgctccgcaactcagaaactcctc
gaagaatccacaaaaaaactcaatgctgtgtttgaggaaaggcgggaggcgtttgccgaa
catttgagtaagatggagttgcgtccccggcgacagccgaaccgcgaccaggatggcagc
tcagccacaaggatggaccgcccggcggagggtaagccagcaggtcaggtagagaagcgg
acaggtaaaaggggggaatcaaggagggaggaagaggaggacgaggaagaggaggaggag
gaaagagagaagcagagtattagacagcagatgggagggggaggtggtcaggagagagag
gaaggggagaaagaggtgttaaataaaatagaagaggtgggggaggaagtgatggaggtg
agtgaggaaggaagcaaggagaagggaggagaggagcagaaggagaaggatgaaaaggaa
gcaagtccagagtcagaggaggtggaggacaaactggagaaggaagacaagggtagggag
aaaggggtagaaatagacaggaaacaggagtccacagaagtccaagaagaaaaaactcca
gatattcactctgaagcagctgtaagcagccaagacgtcccagacacaagtgatcagccc
ccacagagcctcactgcagaagaaccggccacacagtcccctgtgacagaggctgcttct
caaacccaagaaccccaaacggcctctgctacccctgcccaaaatccagtcactcccaca
caggattatattgccccagaatacagcttccagaaccccacagtggaaaaacagcagttg
gaaagaaaagtagaggaggaggtgctcccacaaaagctgcctgattccaaggagctccct
gtaactgcacctggaaaggaggacaaccgaggcagagggagaaagaaggagaaggaagtg
aggaaacgtcatagtcgtaacagctcctcctcttcctcatctggatcctcctccagcggt
agttcatcctcatcctctggatccagccgatcctcctcatcgtcctcatcttcatcatcc
tcgacatccagcagccggagccgagacagtggcaagcgaaagaggaggccgtctgataga
ggcagagatgagaaaaaggaagcgagaagtcaacataagtcaggagggagagactcaaca
gagaggaggaagagaaggagcgaggaaaagaagggcaggccttcccgaagtgatagggaa
aataaagatagagacaggaaggacaagagacgctga
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