Galleria mellonella (greater wax moth): 113518071
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Entry
113518071 CDS
T09996
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
gmw
Galleria mellonella (greater wax moth)
Pathway
gmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113518071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmw03019
]
113518071
03041 Spliceosome [BR:
gmw03041
]
113518071
03009 Ribosome biogenesis [BR:
gmw03009
]
113518071
03016 Transfer RNA biogenesis [BR:
gmw03016
]
113518071
Enzymes [BR:
gmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113518071
Messenger RNA biogenesis [BR:
gmw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
113518071
Spliceosome [BR:
gmw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113518071
Complex C
U4/U6.U5 tri-SnRNP related factors
113518071
Ribosome biogenesis [BR:
gmw03009
]
Eukaryotic type
Pre-60S particles
Helicases
113518071
Transfer RNA biogenesis [BR:
gmw03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
113518071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
Helicase_C
Death_3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
113518071
NCBI-ProteinID:
XP_052757560
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MADINSLFDCFEEPVQNEGSVHFPNIQNCKDKLDSSSSANKRSHEEVEYVDTSQAKIPKH
EEDTLELISDINLELLSSQIVIHALETNEGCTHEVAIPPNYEYAPLTPLTSEPAKQYSFV
LDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKY
REFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRD
KERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVVYTEYRPTPLQHY
IFPAGGDGIHLVVDEKGQFKEDNFNSALAVLSKAGEADKGDKHGRRGGPRGGNQTDIFDI
INMIMERRFAPVIIFSFSKKDCEAYAMQIAKLDYNTIEEKKLVDEVFNNAMDVLSEEDRN
LPQVENVIPLLRRGIGIHHGGLLPILKETVEILFGLGLIKTLFATETFAMGLNMPAKTVV
FTACQKFDGKDFRFISSGEYIQMSGRAGRRGLDDKGVVILMIDQKVTPTVVKNIVQGKAD
PLNSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAAIPDLIDKVKTKEKEYNALTV
DQEHSVAAYCSIRSQLDVLGAQFRSFITRPEYLKPFLQPGRLVKIKTEKYEYDWGFVENI
KHQTQKGKKGQETPLTAEAVIVVDVLLHVKKSDKNDPDSNMPCPPGETGIIEVVPVPHTQ
ICQISSARFYNPKTRRMFDSRDSVLKTMRDAKKRFPKGPPLLDPIKDMKIEDKVFKECAD
RIKQLEERLYAHPLHNDKNRGALTAAYDKKQELYEELSQAKAELKKAKSILHMDELKKRK
RVLRRLGYCTAADVIEMKGRIACELSSADELLLTELIFNGVFNTLTAQQSAALVSCFVCD
ENSSQPSAGEEELRGVLRQLQEYARRIAKVSIDARMDLDEDEYVSKFKCTLMDVVLAWAK
GATFLQISKMTDVFEGSIIRCMRRLEEMLRQLCQAAKNIGNTDLENKFSEAIKLLKRDIV
FAASLYM
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggctgatattaatagtttatttgattgttttgaagagccggtacagaatgaaggttct
gttcattttccgaatattcaaaactgcaaggataaattagattcctcatcttcagcgaat
aaacggtcacacgaagaggtggaatatgtagatacatcacaggcaaaaatacccaagcat
gaagaggatacattagaactgattagtgacattaacttggaactactcagttctcaaata
gttatacacgctttagagacaaatgaaggctgtacacatgaagtggccatacctcctaac
tatgaatatgcaccacttacaccccttacatctgaacctgccaagcagtatagtttcgta
ttggatccatttcagaaggaagccatattatgcatagacaatttgcaatctgtattagtt
tctgctcatacctcagctggtaaaactgtggttgcagagtatgcaattgcactttcactg
aagaacaagcaaagagtgatatacacaactccaattaaggcactttccaatcagaaatac
agagagttctcagaagaattccatgatgtaggactcatcactggagatgtaaccattaat
ccttcagcttcttgtcttattatgactactgagattctaaggaacatgttgtacagagga
tcagagataatgcgtgaggtgggatgggttatttttgacgaaattcactatatgagagac
aaagagagaggagttgtttgggaagaaacattaattctgctgccggacaatgtacattat
gtgttcctctctgcaaccatacccaatgcaaggcagtttgccgagtgggtgtgtcgtcta
cattcacaaccatgccacgtcgtgtacacagagtaccgaccaacgccactgcagcactac
atcttcccagcaggtggtgatggtatccaccttgttgtggatgaaaagggtcaatttaaa
gaagataactttaattcagcgttggcggtgctcagtaaggctggcgaagctgataaaggt
gacaagcacgggcgacgaggcggcccgcgagggggtaatcagacagacatcttcgatata
atcaatatgatcatggaacggcgttttgccccagtgattatattcagtttcagcaagaaa
gactgtgaggcgtacgctatgcagattgccaagttagactataatacaatcgaagagaag
aaattagtggacgaagtgttcaacaacgctatggacgtgctgtctgaagaggatcgcaat
ttgccacaagtagagaatgtgatcccgctgttacgacgcggtatcggcatccaccacggc
ggcctgctgcccatactcaaggagacagtcgagatattgttcggattgggacttattaag
acgctgttcgcaacagaaacatttgctatgggattgaatatgccagccaaaacagtcgta
ttcacggcatgtcagaaatttgatgggaaggacttcagattcatatcgtcaggcgagtat
atccaaatgtcaggtcgcgccggccggcgaggtctcgatgacaagggtgtcgtgatcttg
atgatcgaccagaaggtgacacccaccgttgtcaagaacatagtccaaggcaaggcggac
ccccttaattccgccttccaccttacatataacatggtcctgaatctgttacgagtggaa
gaaatcaacccagagtacatgctggaaagaagtttcttccagtttcaaaatcaagctgca
attcctgatctgatagacaaggtgaaaaccaaggaaaaggagtacaacgcgttgacggta
gatcaggagcactctgtagctgcgtactgcagcatcaggtcgcagctggacgtactcggc
gcgcagttccggtcgttcattactcgtcctgagtatttgaaacctttcctgcagccagga
cgactggttaagattaaaacagaaaagtacgagtacgactggggttttgtagagaacata
aagcaccaaacgcaaaaaggcaagaaaggacaggagactcctctgacggccgaggcggtc
atcgttgtcgatgtattgctgcatgtgaagaagtctgacaagaatgatccggatagcaat
atgccttgtcctccaggagagacaggaattatagaagtggtaccagttccgcatacccag
atctgtcagatcagctcggctagattctacaatccaaagactcggcgaatgtttgacagt
cgggactctgttctcaagactatgagggacgccaaaaagcgctttcccaagggaccacca
cttttggaccctataaaggacatgaagattgaagataaggtgttcaaagagtgtgctgat
aggattaagcaactggaggaaagactgtatgcacatcctctacacaatgacaagaaccgc
ggtgctctcaccgctgcgtacgataagaaacaggaactgtacgaagaactgagccaagcg
aaggcggagttgaagaaagcgaagagcatattgcacatggacgagctgaagaaacgcaag
cgagtgttgcggcggctcgggtactgcacggccgctgacgtcatagagatgaagggacgc
atcgcttgtgaactaagcagtgcggacgagctactattaaccgagctgatcttcaacgga
gtgttcaacacgctgacggcgcagcagagcgcggcgctggtgagctgcttcgtgtgtgac
gagaactcttcgcagccctccgctggcgaggaggaacttaggggtgtgttacggcaacta
caggagtacgcccgtcgtatagcaaaagtgtcgatcgatgccaggatggacctcgacgag
gacgagtacgtgagcaagttcaagtgcacgctgatggacgtcgtgctcgcgtgggccaag
ggcgccaccttcttgcagatctctaagatgactgacgtgttcgaaggttctataatcaga
tgtatgcggcgtctggaagaaatgctgaggcagctgtgtcaagcagccaagaacatcggc
aacacagatctcgaaaataagtttagtgaagcgatcaaactactcaagcgtgacatagtg
ttcgccgccagtctttatatgtaa
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integrated database retrieval system
