Glycine max (soybean): 100170749
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Entry
100170749 CDS
T01710
Symbol
PHR
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100170749 (PHR)
Enzymes [BR:
gmx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
100170749 (PHR)
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
100170749 (PHR)
Prokaryotic type
100170749 (PHR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
100170749
NCBI-ProteinID:
NP_001238710
UniProt:
B1B538
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Position
11:2129067..2132305
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AA seq
500 aa
AA seq
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MASTASPMTVQAGRVRTLKEGSRGESGLGPVVYWMFRDQRVTDNWALIHAVAEANKANVP
VAVVFNLFHTFLGAKSRHLGFMLRGLRQLCHRMQHSLQIPFFLFQGEAEETVPKFLRECG
ASLLVTDFSPLREVRRCKEEICKRVSDSVAVHEVDAHNVVPLWVASDKLEYSARTIRAKI
TKRLSDYLVDFPDIEVEPPAGKWVATENHSIDWDDLIADVLRRGAEVPEVDWCEPGEIAA
SEVLMGSKNGFLTKRLKGYSLDRNNPCHPNALSGLSPYLHFGQISAQRCALEARKRRNSH
PQAIDAFLEELIVRRELADNYCFYQPHYDSLKGAWAWAQNTLTEHATDKREHIYTKEQLE
KAQTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDGR
DPNGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRELKKR
KAENLLSQKEKVVRSCDPED
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacagcgtcgccgatgacggttcaggcgggtcgggttcggaccctgaaagaa
ggttctcgcggagaatcgggtttgggtccggtcgtgtactggatgttcagagaccaacgt
gtgacagacaattgggctctgatccacgctgttgctgaggccaacaaagccaacgttccc
gttgccgttgttttcaatctcttccacacctttcttggcgccaaatcccgtcatttaggg
ttcatgctcaggggcttgcgccaattgtgccaccgtatgcaacactctcttcaaatcccc
tttttcttgttccagggagaggcagaggagacagtgccaaagtttcttagagaatgtgga
gcttcacttttggtgacggatttctcacctttgcgggaagtacggaggtgtaaagaagag
atatgcaagagggtaagcgattcggttgctgtgcatgaagtggatgctcacaacgttgtg
cccctttgggttgcctctgataaattggagtacagtgctaggaccatcagggcgaagata
accaaaaggctttctgactatctcgttgatttccctgacattgaagttgagccaccagct
gggaagtgggtggctactgagaaccattccattgactgggatgatctcattgctgatgtg
ttaaggagaggagcagaggttcctgaagttgattggtgtgagccaggggaaattgccgca
agtgaagtattaatgggaagtaaaaatggattcttgactaaaaggttgaaaggttattcc
ctggaccgcaacaacccgtgccaccccaatgcgctttctggcttatctccctatttgcac
tttggacagatatctgctcagcgatgtgctttagaagcacgtaagcggcgaaattcacat
cctcaagcaattgatgctttcttggaggagttgattgtgcggagagagcttgctgataac
tattgcttctaccagcctcattatgattcattaaaaggagcatgggcatgggctcagaac
accttaactgaacatgccactgataagcgagaacatatttacacgaaggagcagttggag
aaggcacagacagctgatcctctctggaatgcttctcagctggagatggttcactatggg
aaaatgcatggttttatgagaatgtattgggcaaagaagatacttgagtggacacgagga
cctgaagaagcccttgagatatctttgtatttaaatgacaagtatgaattagatgggaga
gatccaaatggttatgttggctgcatgtggtcaatatgtggggttcatgatcagggttgg
aaagagcggcccatttttgggaaaattcgatacatgaactatgcaggctgcaaaagaaaa
tttgatgtcgataaatacattgcatatgtcaataaattagttcgtgagctcaaaaagagg
aaggctgaaaacttgctatctcaaaaggagaaagtagttcgcagttgtgatcctgaagat
tga
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