Glycine max (soybean): 100305380
Help
Entry
100305380 CDS
T01710
Symbol
SHMT
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00260
Glycine, serine and threonine metabolism
gmx00460
Cyanoamino acid metabolism
gmx00630
Glyoxylate and dicarboxylate metabolism
gmx00670
One carbon pool by folate
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
gmx01200
Carbon metabolism
gmx01230
Biosynthesis of amino acids
gmx01240
Biosynthesis of cofactors
gmx04981
Folate transport and metabolism
Module
gmx_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
100305380 (SHMT)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
100305380 (SHMT)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
100305380 (SHMT)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
100305380 (SHMT)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
100305380 (SHMT)
Enzymes [BR:
gmx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
100305380 (SHMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
100305380
NCBI-ProteinID:
NP_001355691
UniProt:
K4FZF8
Structure
PDB
PDBj
LinkDB
All DBs
Position
8:8360676..8363203
Genome browser
AA seq
471 aa
AA seq
DB search
MDPVSVWGNTPLATVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
EGMPGNRYYGGNEYIDQIENLCRSRALQAFHLDAQSWGVNVQPYSGSPANFAAYTAVLNP
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNSTTGYIDYDRLEEKALDF
RPKLIICGGSAYPRDWDYKRFREVADKCGALLLCDMAHTSGLVAAQEVNSPFEYCDIVTT
TTHKSLRGPRAGMIFYRKGPKPPKKGQPENAVYDFEDKINFAVFPSLQGGPHNHQIGALA
VALKQAASPGFKAYAKQVKANAVALGKYLMGKGYSLVTGGTENHLVLWDLRPLGLTGNKV
EKLCDLCNITVNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLHRAVTLTL
EIQKEHGKLLKDFNKGLVNNKAIEDLKADVEKFSALFDMPGFLVSEMKYKD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtaagcgtgtggggtaacacgcccttggcgacggtggatcccgagatccat
gacctcatcgagaaggagaagcgccgtcaatgccgcggaatcgagctcatcgcctccgag
aacttcacctccttcgccgtcatcgaggccctcggcagcgctctcacgaacaaatactcc
gagggcatgccgggcaaccgctactacggcggcaatgaatacatcgaccagatcgaaaac
ctctgccgctcacgcgccctccaagccttccacctcgacgcccaatcctggggcgtcaac
gtccagccctactccggctccccggccaacttcgccgcctacaccgccgtcctcaacccc
cacgaccgcatcatggggctagatctcccctccggcggccacctcacccacggctactac
acctccggcggaaagaagatctccgccacctccatttacttcgagagtctcccttacaag
gtaaactccaccaccggctacatcgactacgaccgcttggaagaaaaagccctagacttc
aggccaaaactcataatctgcggtggcagcgcgtaccctcgcgattgggactacaaacgt
ttcagggaagtcgctgataagtgcggagcattgcttctctgcgacatggcgcacactagc
ggccttgtggccgcgcaggaagtgaacagccccttcgagtattgcgacattgtgaccacc
acgactcacaagagcttgcggggcccacgtgcggggatgatcttttaccggaagggcccc
aagccgccgaagaaggggcagccggagaacgcggtttatgatttcgaggacaagattaac
ttcgcggtgttcccttcgctgcagggtgggccccacaaccaccagatcggtgctctcgcc
gtggcgctgaagcaggccgcgtcgcccgggtttaaggcctacgcgaagcaggttaaggcg
aacgccgttgcgcttggaaaatacttgatggggaaagggtacagccttgtcactggcgga
acggagaaccatcttgttttgtgggatctgagacctcttggattgactgggaataaggtg
gagaaactctgtgatctctgtaacattactgttaacaagaacgctgtttttggtgatagc
agtgccttggcccctggtggagtgcgaattggtgcccctgccatgacttctaggggtttg
gttgaaaaagactttgagcagattggtgagttccttcaccgtgctgtgactctcacactg
gagatccagaaggagcatggcaaacttctcaaggatttcaacaagggtctcgtcaacaac
aaggctattgaagatctcaaagctgatgttgagaagttctctgccttgtttgacatgcct
ggcttcctggtatctgaaatgaagtacaaggattag
DBGET
integrated database retrieval system