| Entry |
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| Name |
(RefSeq) BRCA1 carboxy-terminal domain-containing protein
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
gmx Glycine max (soybean)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:gmx00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100306420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gmx03019]
100306420
04121 Ubiquitin system [BR:gmx04121]
100306420
03036 Chromosome and associated proteins [BR:gmx03036]
100306420
03400 DNA repair and recombination proteins [BR:gmx03400]
100306420
Messenger RNA biogenesis [BR:gmx03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100306420
Ubiquitin system [BR:gmx04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100306420
Chromosome and associated proteins [BR:gmx03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100306420
DNA repair and recombination proteins [BR:gmx03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100306420
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
19:43246213..43252966
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| AA seq |
660 aa
MDDSGSKTKLLNPWMLHFQKLALELKCPLCLSLFKRPVLLPCNHLFCNSCLADCITAGPG
CAVCKATYAQTDVRHVPFVENVVAIYRSLDATFCASLFQPCSSGDGRVLEPCQAILNSTS
SSLKAAKLPRNLTNSNEVGVGKNFKSKSVVHDKAEEFELSRERGKPNPMQSSHMELGGRE
ECGVMEMDVNQVTQSAPDSPPFCDTKGSDNDFSDQGSEHPLLPGRLENSSLKRAGTGNGN
LKERMGQLRSESSASETEGLARDLKRQKNLDFKPGKEPGAPLPKIDMCPTGRICSFCQSS
KISEATGPMLHYANGNLVTGDAAMKPNVIPVHRICIDWAPQVYFVGEVVKNLKAEVARGA
KLKCSKCNLKGAALGCYVKSCRRTYHVPCAMDISDCRWDHEDFLLLCPVHSNVKFPCEKI
RSKKKATQKHPTFSHLPSHHSNRLEASQDASKKLVFCGSALSNEEKVFLINYASKVGATV
TKFWTSNVTHVIAATDAHGACSRTLKVLMAILNGRWVLKMDWIKACMQEINPVEEEPYEI
NLDNQGCQGGPKAGRLRALANEPKLFSGLKFYFSGDYVSTYKEDLEELIEVGGGTVLRIK
EELEAHRHECKGDSSKLLVVYNLDPPQGCKLGEEVSILWQRLNDAEDLAANTLQGVLCKS |
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| NT seq |
1983 nt +upstreamnt +downstreamnt
atggatgattctggaagtaaaactaaactgttgaatccatggatgctccacttccagaaa
ctcgctctcgaactcaagtgccctctctgtttgagtttgttcaagaggccggtgttactt
ccatgcaaccacttgttctgcaattcatgtttggctgattgcataacggctgggcctgga
tgtgctgtttgtaaggcaacgtatgctcaaacagatgttaggcatgtgccttttgtggaa
aacgtggtggcaatatatagaagcttggatgccactttttgtgctagtttgtttcagcca
tgttcttctggtgatgggagggttttggagccgtgccaagcaattcttaattcaacttct
agtagtttaaaagctgccaagcttcctcggaatttaactaattcaaatgaggttggggtt
ggcaagaatttcaaatccaagagtgtggtgcatgacaaagcagaggagtttgagttgtct
cgtgagagagggaagcccaatccaatgcaatcttcccatatggaacttggtggccgcgaa
gagtgtggagttatggaaatggatgtgaatcaagtgacacaatcagcaccagatagccca
cccttttgtgataccaaaggttcagataatgacttcagtgatcaaggcagtgagcatcca
ttacttcctggtagattggaaaattcttcactaaagagagctggcacaggaaatggaaat
ttgaaagaaagaatgggacagctcaggtctgaaagttcagcctctgaaactgagggtctt
gcaagggatctcaagagacagaagaatctggactttaaacctggaaaggaacctggtgca
ccattgcccaaaattgacatgtgtccaaccggaaggatctgttcattttgccaatcctct
aaaatctcagaggctactggaccaatgctgcattatgcaaatggaaacttagttacagga
gatgcagcaatgaaaccaaatgtcatacctgtgcatagaatttgcattgactgggcacca
caagtgtactttgttggtgaagttgttaagaatttgaaggcagaggtggcaaggggagca
aaacttaaatgcagtaaatgtaatctaaagggagctgctcttggttgctatgtcaaatcc
tgtagaagaacgtatcatgttccttgtgcaatggacatctcagattgccgttgggatcat
gaggattttctcttgctctgtcctgtccattcaaatgtcaaatttccatgtgagaaaatc
aggtccaagaaaaaggcaacacagaagcatcccactttttctcatctgccatctcatcac
tcaaatcgtcttgaagcttcccaggatgctagtaaaaaattggtattttgtggatctgct
ctatcaaatgaagaaaaggtatttttgatcaattatgcaagcaaggttggtgctactgtg
accaagttctggacctcaaatgtcacccatgtaattgcagcaactgatgcacatggagca
tgctccaggacgttgaaagttctgatggcaattctaaatggacgatgggttctaaaaatg
gattggataaaagcatgcatgcaagagataaatcctgtagaggaagaaccgtatgaaatt
aatcttgacaatcaagggtgtcaaggtggcccaaaagctggcagacttagggcattggcc
aatgagcccaagctattcagtggcttaaagttttatttttctggagattacgtgtcaact
tataaggaagatcttgaagaattaattgaagtggggggaggtactgttttgagaatcaag
gaagaattggaagcacacagacatgaatgcaaaggggattcttcaaagttgctagttgtt
tacaaccttgatcccccacaaggatgcaagttgggggaggaagtttcaattctttggcaa
aggctaaacgacgcagaggatttagctgcgaacactttacaaggcgttctctgcaaaagt
tga |
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