Glycine max (soybean): 100306498
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Entry
100306498 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100306498
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100306498
09123 Folding, sorting and degradation
03018 RNA degradation
100306498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100306498
03041 Spliceosome [BR:
gmx03041
]
100306498
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100306498
mRNA degradation factors
5'-3' decay
Lsm complex
100306498
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100306498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
100306498
NCBI-ProteinID:
NP_001235908
UniProt:
C6SZM9
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Position
8:complement(8182661..8185895)
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AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFMQPDGS
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagaaaagaaacggttttggaccttgcaaagtttgtagacaaaggcgttcaa
gttaagcttactggtggaagacaagtgacagggactctgaaagggtatgatcaattgctt
aaccttgtcctagatgaagctgtagagtttttaagagatcctgatgatcctctcaaaact
actgaccagaccagaaatcttggcttaattgtttgtagaggaactgctgtgatgcttgtg
tccccaactgatggtacagatgagatcgccaacccctttatgcagccagatgggtcctaa
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