Glycine max (soybean): 100337654
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Entry
100337654 CDS
T01710
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100337654
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmx01002
]
100337654
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100337654
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100337654
Peptidases and inhibitors [BR:
gmx01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100337654
Ubiquitin system [BR:
gmx04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100337654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
100337654
NCBI-ProteinID:
XP_003535946
LinkDB
All DBs
Position
10:30680772..30708300
Genome browser
AA seq
1121 aa
AA seq
DB search
MTLMTPPPMDQQQQQQEHDEMLVPRSDLPEGPQPMEAAQAEIPSTVDAPTVDAPTVDDTP
TAKFTWTIDNFSSISQKLFSDIFCVGGYKWRILIFPKGNGAGHLSMYIDVADSATLPYGW
SRYAHFNLTVVNQIHSKYSIRKDSQHQFNARESDWGFINFMPLAELYDPARGYLVNDTCI
VEADISVRKDMDWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHISYFRKAVYHMPTTEN
DMPSVSIPLALQSLFYKLQYSDTSVATKELTTSFGWDTYDSFMQHDVQELNRVLCEKLEG
KMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVE
VEQLEGDNKYHAEHYGLQDARKGMLFIDFPPVLQLQLKRFEYDCTRDTMVKINDRYEFPL
QLDLDMDNGKYLSPDADRSIRNFYTLHSVLVHSSGVHGGHYYAYIRPTLSNQWFKFDDER
VTKEESKRALEEQYGGEEELPCINPGFDHSPFRFTKHSNAYMLVYVRESDKDKIICNVDE
KDIAEHLRMRLKKEQDEKELKRKEKAEAHLYTTIKVACDEDLREQIGNNIHFDLVDYDKV
RSFRVQINMPFMVFKEEVAKEFGIPIQYQRFWLWAKRQNNTYRPNRTLTPQEEAQSVGLL
REVSTKANNAALKLFLELEMGQDLRPIPPPEKSKENLLLFLKLYEPSNEKLRYVGRLFVN
SSGKPEDILVKLNEMAGYDPDQDIDMFEEIKFVPNVMCERVDKKSTFRESQLEDGDIICF
QKSSPQTGSGERYRYPDVPSFLEYVHNRLVVRFRTLEKPKEDEFSLELSKLDSYDNVVEE
VAQHIGLHDPSKIRLTSHNCYSQQPKAQSIKFRGMEHLTDMLIHSNQTSDILYYEVLDIP
LPELQCLKTLKITFHHATKDEVVIHTIRLPRHSTVSDVINDLKSKVDLSHPDAELRLLEV
FYHKIYKIFRVNEKIENINDQYCALRAEEIPEEEKNLGSHDRLIHVYHFLKDTTQNQQVQ
NFGHPFLLVIREGETLAEVKLRIQKKLQVPDEEFSKWKFAFLSFGRPEYLQDSDIVSTRF
QRRDIYGAWEQYLGLEHIDSASKRSNTANQNRHEKAVKIYD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccaatggatcagcaacagcagcagcaggagcacgatgag
atgctggttcctcgctctgacctgcctgaaggtcctcaacctatggaagcagcccaagca
gaaatcccaagtacagtggatgctccaacagtggatgctccaacagtggatgatacacca
actgcaaaattcacttggaccattgacaatttttctagtatttcccaaaaactattttct
gacattttctgtgtagggggctataagtggcggatacttatatttccaaagggaaatggt
gctggccatctgtcaatgtatatagatgttgcagattcagctacattgccctatggttgg
agtagatatgcccacttcaacttgactgttgttaatcaaattcatagtaaatattcaata
agaaaagattcacaacatcagttcaatgcacgtgagagcgactggggtttcattaatttc
atgccacttgctgaattgtatgatcctgctagaggttatcttgtgaatgatacatgcata
gttgaagctgacatttctgtgcgtaaagatatggattggtcatatgattcaaaaaaggaa
actggttatgttggactgaaaaatcaaggagctacatgttatatgaattctctgcttcaa
acattgtaccacatttcttatttccgaaaggctgtgtaccatatgcccacgactgaaaat
gatatgccatcagtgagcatccctctggcattacaaagtttgttttacaaattgcagtat
agtgacactagtgtggcaacgaaagagttaacaacgtcttttggatgggatacatatgat
tcgttcatgcagcatgatgtccaagagcttaatagggttctttgtgaaaagctagaaggc
aaaatgaagggaactgttgtggaaggcactatacagcaattgtttgaaggacaccatatg
aactatattgaatgcataaatgtggattataaatcaacaaggaaagaatcattttatgat
cttcagcttgatgtcaaaggctgtaaggacgtatatgcttcttttgataagtatgtggaa
gtggaacaacttgagggtgataacaagtatcatgctgagcactatggtttacaggatgct
aggaagggtatgttgttcattgatttcccacctgttcttcagcttcagttaaaacggttt
gagtacgattgtacgcgagacactatggtaaagatcaatgaccgctatgagttccccttg
caactagatcttgatatggataatgggaaatatctatctcctgacgcagacagaagtatt
cgcaatttttatacacttcacagtgttttggttcacagtagtggggtgcatggcggacac
tactatgcttacattaggccaacactatcaaatcagtggtttaaatttgacgatgagcga
gtaacaaaagaagaatccaagagggctttggaagaacagtatggtggtgaagaagagtta
ccttgtataaatcctggcttcgaccactctccttttagatttacaaaacactcgaatgca
tatatgcttgtctatgtacgtgagagtgacaaggataaaataatttgtaatgtggacgag
aaggacattgctgaacaccttagaatgagattaaagaaagaacaagacgaaaaagagctg
aagaggaaggagaaggctgaggctcacttgtacaccaccataaaggttgcttgtgatgaa
gatctacgtgaacagattggaaataatatacactttgatcttgtggattatgataaagta
cgaagttttcgtgttcaaataaacatgccttttatggttttcaaggaagaagttgccaaa
gagttcggcatacccatccagtatcaacgtttttggttgtgggcaaagcgccaaaacaac
acatataggccaaatagaacactgacacctcaggaagaagcacaatcagttggactgcta
agagaagtttccactaaagcaaataatgcagcgctgaagttatttttggaactagaaatg
gggcaggatttgcggcctattcctcctccagagaagtcaaaagagaatctcttgcttttc
cttaaactttatgagccttcaaatgagaagcttcggtatgttgggcggctttttgtgaat
agtagtgggaagccagaagatatactggtaaaactaaatgaaatggccggatatgatcct
gatcaagatatagacatgtttgaggagatcaagtttgtgcctaatgtcatgtgtgaacgg
gttgacaagaaatccacattccgtgagagtcagcttgaggatggtgatattatttgcttc
caaaagtcctccccccaaactggaagcggagagcgatatcgctatccagatgttccttct
ttcttggaatatgtgcataaccgtttggttgttcgctttaggactttggagaaaccaaag
gaggatgaatttagtcttgagctgtcaaagcttgactcctatgacaatgttgttgaagaa
gttgctcaacatattggtttgcatgatccttctaaaattagactcacatctcataactgc
tactcccagcaacctaaagcacagtctatcaagttccgaggaatggaacatttgacagac
atgctaattcactctaatcagacttctgatattctatactatgaagtattggatatccct
ctgccagaattgcaatgcctaaaaactcttaaaattactttccatcatgctaccaaggat
gaagttgtgattcatactattagattaccgagacatagtactgtgtcagatgtaattaat
gatcttaaatcaaaggtagatctatcacatcctgatgcagaacttagattgcttgaagtt
ttctatcacaagatttataagattttccgtgtcaatgaaaagattgagaacattaatgat
caatattgtgcacttcgagcagaggagattcctgaagaagagaaaaaccttggctcgcat
gatcggttgatccatgtttatcatttcttgaaagacacaactcaaaatcagcaagttcag
aattttggacatccttttttattggttatccgtgagggtgagacattggctgaagtcaaa
ttgcgaatacagaaaaagttgcaagttccagatgaggagttttcaaagtggaagtttgca
tttttgtcgtttggtcgtcctgagtaccttcaagattcagatattgtatccactcggttt
cagagaagggatatctatggtgcatgggagcaatatctcggactggaacacatcgacagt
gcttcaaaaaggtcgaacacagccaatcagaatcgtcacgagaaggctgtaaaaatctat
gattag
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