Glycine max (soybean): 100499944
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Entry
100499944 CDS
T01710
Name
(RefSeq) RNA-binding (RRM/RBD/RNP motifs) family protein
KO
K12897
transformer-2 protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100499944
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100499944
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100499944
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100499944
Spliceosome [BR:
gmx03041
]
Common components
Common spliceosomal components
SR proteins
100499944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
RRM_11
Motif
Other DBs
NCBI-GeneID:
100499944
NCBI-ProteinID:
NP_001237888
UniProt:
I1MMZ7
C6T0S6
LinkDB
All DBs
Position
16:27186873..27190111
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AA seq
240 aa
AA seq
DB search
MADSPLARNSRSPSPWKAQSRSRSRSRSRSRSRPRQRPRSRSRSHGRSRSPIHGRSRSPI
HGRSEPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTME
SAEDAERCIKYLNQSVLEGRYITIERSRRKRARTPTPGHYLGLKNTREYGFRGERGRYRD
GPDRDNYSRRRSPRRSPYRGGQDYSPRRSPYGGRSRRDSSRSLPYSPHGSPDRKYARGSR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctccccttgcaaggaattcaaggtccccttccccgtggaaagctcagtcg
agatctaggtctaggtcaagatctaggtcgaggtctaggcctagacaaaggccaagatcc
cgttctagaagtcatggcaggtcaagatcaccaattcatggaaggtcaaggtcacccatt
catggaaggtccgagccttcaaatcctggtgacacactttatgtaaccggtctatcttca
agggtcactgaaagagacctagaggagcatttctccaaggaaggaaaggtttcttcatgt
tttcttgtggtggagccccgtacacggatttctcgtggttttgcttttgttacaatggaa
tctgctgaggatgcggagcgctgtatcaagtatctcaatcaatcagttttagagggtcgt
tacatcacaattgagcggtcacgaagaaaacgtgcaagaactccaaccccagggcactat
cttggactgaaaaacactagggagtatggctttcgtggtgagcggggaaggtatcgcgat
ggtcctgaccgtgacaattattcacgccgtaggtctccaaggcgttcaccgtacagaggt
ggccaagattattcaccccggcgctcaccctatgggggaaggtctaggagggatagctct
aggtcgcttccttattctccacatggtagcccagacaggaagtatgctcgtggatctagg
tga
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