KEGG   Glycine max (soybean): 100527187
Entry
100527187         CDS       T01710                                 
Name
(RefSeq) uncharacterized protein LOC100527187
  KO
K12876  RNA-binding protein 8A
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
gmx03015  mRNA surveillance pathway
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100527187
  09122 Translation
   03013 Nucleocytoplasmic transport
    100527187
   03015 mRNA surveillance pathway
    100527187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100527187
   03041 Spliceosome [BR:gmx03041]
    100527187
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100527187
Spliceosome [BR:gmx03041]
 Complex C
  Other components
   EJC/TREX
    100527187
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3 RRM_ACIN1
Other DBs
NCBI-GeneID: 100527187
NCBI-ProteinID: NP_001236162
UniProt: C6T3K0
LinkDB
Position
11:1061066..1063469
AA seq 204 aa
MQGSAADGEALDFEPEDDDLMDEDGAPDADADASPPQPKLKSAITPAATSSLSAPKKTKG
RGFRQDTDANRNTRLSGTDFDSLTAEGGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGE
YGEIKNLHLNLDRRTGFVKGYALIEYERAEEARNAIENLNGSELLTQTIYVDWAFSSGPI
NESVRRKNARPPRERRSRSPRRRY
NT seq 615 nt   +upstreamnt  +downstreamnt
atgcaaggaagcgcggccgacggagaagccttggatttcgagcctgaggacgatgacttg
atggacgaggacggcgcccccgacgccgacgccgacgcttctccacctcaacctaagctc
aaatccgccatcacccccgccgccacttcctctctctccgccccgaagaagaccaagggc
cgcggattccgccaggacactgacgccaaccgcaacactcgcctctccggcaccgacttc
gactctctcaccgccgagggcggccctggccctcagagatccattgagggatggatcatt
ctggtcaccggcgtgcacgaggaagcgcaagaggacgatttgcaaaatgcctttggtgaa
tatggagagattaagaacctgcatttgaatctcgatcgccgcactggttttgtcaaaggt
tatgcactgattgaatatgagcgtgctgaagaagctcgaaatgcaatagagaatttgaat
ggatctgagcttcttacccaaaccatttatgttgattgggccttcagcagtggacctatt
aatgagtcagtcagaagaaagaatgctagaccacctcgtgaacggcgttccaggagcccc
cggaggagatactga

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