Glycine max (soybean): 100775595
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Entry
100775595 CDS
T01710
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100775595
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100775595
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100775595
NCBI-ProteinID:
XP_003520660
UniProt:
I1JPR5
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Position
3:complement(40892350..40896112)
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AA seq
470 aa
AA seq
DB search
MLLQTTCIFLLSVLLSSFSPLGTAMLNLTLPGAHPDPEAVAHEVHRKVNASIARREMLSV
SEKDGSSCLTGNPIDDCWKCDPDWPNNRQRLADCVIGFGQYAKGGKGGEFYVVTDSSDDD
PVNPKPGTLRYAVIQNEPLWIVFPSNMMIKLSQELIFNSYKTIDGRGADVHIVGGGCITL
QFISNVIIHNIHIHHCHPSGNTNVRSSPEHYGFRTESDGDGISIFGSKDIWIDHCTLSRC
KDGLIDAVMGSTGITISNNMLSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMP
RCRRGYIHVVNNDFTEWEMYAIGGSGEPTINSQGNRYMAPENPFAKEVTKRVDTQQSKWK
GWNWRSEGDILLNGAFFVASGEELEVKYEKAYSVQPKSADRISFLTMSAGVLGNARDNNL
GMWSRGPADDTTESGMEYTDDMSTTATMLLSSFLLLFFLSYTILRLTVIL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccaaacaacctgcatttttctactctcagttcttctgagctcgttttcacca
cttggaacagcaatgctcaacctcactcttcccggagctcatcctgaccccgaagccgtt
gcccacgaagttcataggaaggttaatgcttcaatcgcaagaagggaaatgctatcagtg
tctgaaaaagacgggtcttcgtgcctaacgggaaatcccatcgatgattgttggaaatgt
gacccagattggccaaataaccggcagaggctagctgactgcgtcattgggttcggtcag
tacgcaaagggaggaaaaggtggtgaattttacgttgttactgattcctctgatgatgac
cctgtgaacccaaaacctggcacgcttagatacgcagtgatacagaacgagccactgtgg
atcgtgttccctagtaacatgatgattaagctgtctcaggaactgatttttaacagctac
aagaccattgatgggcgtggagctgatgtgcacattgtgggaggagggtgcattactttg
cagtttataagcaatgtcatcattcacaacattcacatccatcattgtcatccctcaggg
aacacaaacgttcggtcaagcccggagcactacggattccggacagaatcagacggagac
ggcatctccatcttcgggtcgaaggacatatggatcgaccactgcaccctttcacggtgc
aaggacggtctgatcgacgcggtgatggggtccacagggataaccatctccaacaacatg
ctatcccaccacaacgaggtcatgctactcggccacagcgacgactacctccctgactcc
ggaatgcaggtcaccatcgccttcaaccacttcggggagaagctcgtccagcgcatgccc
cgctgccggaggggatacatccacgtcgtcaacaacgacttcaccgagtgggagatgtac
gccattggtggcagcggcgagcccaccataaacagccagggtaaccgttacatggcaccg
gaaaaccccttcgctaaggaagttactaagagagtcgacacgcaacagtccaagtggaag
ggatggaactggcgctccgagggtgacattctcctgaacggggccttttttgttgcgtct
ggtgaagaacttgaagttaagtatgagaaggcatacagcgtccaacccaaatccgctgat
cgcatctcttttctcaccatgtccgcaggtgttctcggtaatgccagggacaacaacctt
ggcatgtggagcagaggacctgccgatgacaccacggagtccggaatggaatacacggat
gacatgtccaccactgcaacaatgcttctgtcttcttttttgcttctcttcttcttgtct
tacacgatattacgcttgacggttattctttaa
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