KEGG   Glycine max (soybean): 100775776
Entry
100775776         CDS       T01710                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gmx03009]
    100775776
Ribosome biogenesis [BR:gmx03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    100775776
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR54 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_2nd Beta-prop_VPS8 Beta-prop_BBS7 Beta-prop_LRRK2 WD40_RFWD3 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 100775776
NCBI-ProteinID: XP_003551778
UniProt: I1N4S1
LinkDB
Position
18:55997850..56003960
AA seq 449 aa
MEVVLASSSVDGGIGCWDLHTGAEQLRYKSCTSPSHGLVSVAARFIASSQLREDQSAPGS
VLFWSWSKPQVEVKSFPAEQIKPLATNHPGTFIAAGAPSGDIYLWEVETGRLLKKWHAHF
RAVSCLVFSEDDSLLVSGSEDGSVRVWSLFMIFDDLRNQQASSLYEYSFSEHTLTVTDVV
IGNGGCNAIIVSASKDRTCKVWSLSRGMLLRNIVFPSIINCIALDPAEHVFYAGSEDGKI
FIAALNTESIATNNYGMHIISSFSNHSNQVTCLAYGSSENLLISGSEDGMVRVWNARTRN
IVRMFKHSKGPVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDSDM
KTMISLGGGRKSVDPSYISSHVISNYIKELQHQGSAAASEMEMEKLKHDYQKSVQMANQL
KKMNEKLHQFCVKELLDGSQARTLGENDN
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaggttgttttggcgtcgtcgtccgtcgacggcggaatagggtgctgggaccttcac
accggcgcggagcagctccgctacaaatcttgcacctccccttctcatggcctcgtctct
gtcgctgctcgcttcatcgcttcgtcgcagcttcgagaagatcaatcagcccctggctct
gttctcttctggtcctggtccaagcctcaagttgaagtgaagagttttcctgctgaacaa
attaaacctcttgctactaatcacccgggaacctttatagctgctggagctccgtctggt
gacatttacttgtgggaggttgaaacgggtaggttgcttaagaagtggcatgctcatttt
agggcggtttcttgcttggtgttttccgaagatgactcgctgctggtatctggttctgaa
gatggatccgtaagagtttggtctctcttcatgatatttgatgatttgcgaaatcagcaa
gcaagtagtctttatgagtatagtttttcagagcacaccctgactgtgactgatgttgtt
attggtaatggagggtgcaatgcgattatcgtgtcagcttcaaaggatcggacttgtaag
gtatggagcttatctaggggaatgctactaagaaatatagtattcccttcaataattaat
tgcattgcattggatccagccgaacatgtcttttatgctggcagtgaagatggaaagata
tttatcgcagcacttaacactgaaagcatcgccactaataattatgggatgcatatcatc
agttctttttctaaccacagcaaccaagttacttgcttagcatatggctcaagtgagaat
ttgttaatatctgggtcagaggatggaatggttcgtgtttggaatgcgagaactcgtaac
attgtccgcatgtttaaacattctaaaggacctgtaaataacattctcgttgttagacga
gaaaatgactccagtaatcacatatcttctaatgtacaagcatcatcaagaaagcaggga
tctaatttaccccctccattggaaaaatatgcaaattcaatagatgacgactcagatatg
aagactatgatcagccttgggggtggcaggaaatctgtggatccttcatacatcagttct
catgtgatatctaattacattaaggaacttcagcatcaaggttcagctgctgcttctgaa
atggagatggagaaactaaaacatgattaccaaaagtcagtgcaaatggctaaccagttg
aagaaaatgaatgaaaaattgcatcaattttgtgtaaaggagctgttggatggtagtcaa
gctagaaccttgggtgaaaatgacaattaa

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