Glycine max (soybean): 100775785
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Entry
100775785 CDS
T01710
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100775785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100775785
03041 Spliceosome [BR:
gmx03041
]
100775785
03036 Chromosome and associated proteins [BR:
gmx03036
]
100775785
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100775785
Spliceosome [BR:
gmx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100775785
Complex B
100775785
Complex C
U2 SnRNP specific factors
100775785
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100775785
TFTC complex
100775785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
100775785
NCBI-ProteinID:
XP_003536777
UniProt:
I1LFD7
LinkDB
All DBs
Position
10:50998957..51004290
Genome browser
AA seq
1214 aa
AA seq
DB search
MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA
IRSLAQFRLMGAQKDYIVVGSDSGRIIILEYNKEKNVFDKIHQETFGKSGCRRIVPGQYL
AIDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTLVYSICGVDCGFENPI
FAAIELDYSEADQDSTGQAASEAQKHLTFYELDLGLNHVSRKWSEQVDNGANLLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPEVRAVIPRRADLPAERGVLIVSAAMHKLKNMFFFLLQ
TEYGDIFKVTLEHNNDRVSELKIKYFDTIPVTASMCVLKSGFLFAASEFGNHALYQFKSI
GDDDDVEASSATLMETEEGFQPVFFQPRRLKNLVRIDQVESLMPIMDMKVSNLFEEETPQ
IYTLCGRGPRSSLRILRTGLAVSEMAVSKLPGIPSAVWTVKKNVIDEFDAYIVVSFTNAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPNGIRHIREDGRINEWRTPGKR
SISKVGSNTLQVVIALSGGELIYFEMDVTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDKTIRILSLDPDDCMQALSVQSVSSAPESLLFLEVQASVGGEDGADHPASLFL
NAGLQNGVMFRTVVDMVTGQLSDSRSRFLGLRAPKLFPIIVRGKRAMLCLSSRPWLGYIH
QGHFLLTPLSYETLEYAASFSSDQCVEGVVAVAGEALRIFTIERLGETFNETVIPLRYTP
RKFVLQPKRKLLVMIESDQGALTAEEREAARKECFEAAQAGENGTGSADQMENGGDDEDK
DDPLSDEHYGYPKAESDKWASCIRVLDPRTSNTTCLLELQENEAAFSICTVNFHDKEYGT
LLAVGTAKGLQFLPKRTVTAGFIHIYRFVEDGRSLELLHKTQVEGVPLALCQFQGRLLAG
IGPVLRLYDLGKKRLLRKCENKLFPNTIISIHAYRDRIYVGDVQESFHYCKYRRDENQLY
IFADDCVPRWLTASYHIDFDTMAGTDKFGNIYFVRLPQDVSDEIEEDPTGGRIKWEQGKL
NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIVFGTVMGSVGALHAFTSRDDVDFFS
HLEMHMRQDHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQYPTLPMDLQRKIADELDRTPG
EILKKLEEVRNKII
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacagtctcactctgcagcgtcccaccggcatcatctgcgccatcaacggc
aacttctccggcggcaagagtcaggaaatcgtggtggcccgtggcaaggtcctcgatctc
ctccgccccgacgacaacggccggatccaaaccatcctctccgttgaaatcttcggcgcc
atccgctccctcgcccagttccgcctcatgggtgcccagaaggactacatcgtcgtcggc
tccgattccggtcgcatcatcatcctcgaatataacaaggagaagaacgtcttcgacaaa
atccaccaagaaaccttcggcaaatccggttgccgacgaattgtccccggccagtacctc
gccatcgatcccaagggtagggccgttatgattggcgcctgcgagaagcagaaacttgtt
tatgttttgaatagagacaccgctgctaggttaaccatttcttcccctttagaggctcat
aaatcccacactttagtttactcaatttgtggcgttgattgtggctttgagaaccctatt
tttgctgctattgaattggattactccgaggctgaccaggattccactggccaggctgct
tctgaggctcagaagcatttgaccttttatgagcttgatcttggccttaaccatgtctct
aggaagtggtctgagcaggttgataatggggcgaatttgcttgttactgttcctggaggt
ggtgatggccccagtggtgtgcttgtttgtgctgagaattttgttatttataagaatcag
ggacatccggaggttagggctgtgattcctcggcgggccgacttgccggctgagcgtggc
gtgcttattgtgtcggctgctatgcataaattgaagaacatgttcttcttcctcctgcag
acggagtatggggatatttttaaggtcaccttggaacacaataatgatcgcgtctcggag
ttgaagattaagtattttgatacgattcctgttacagcttcaatgtgtgtgctgaagtcg
gggttcttgtttgcagcgtcggagtttgggaaccatgctctgtatcagtttaagtctata
ggggatgatgatgatgtggaggcatcgtctgccacgttgatggaaactgaggaaggtttt
cagcctgtgtttttccagcccaggaggctgaagaaccttgttaggattgaccaggttgag
agtttgatgccgatcatggatatgaaggtcagtaatctctttgaagaggaaactcctcag
atttacactctctgtgggcgtggtcctcgatcctctttgaggatcctgagaactggttta
gcagttagtgagatggctgtgtccaagcttcctggtatacctagcgctgtttggacagtg
aagaagaatgttattgatgagtttgatgcatacattgttgtgtcattcacaaacgctaca
cttgtgctgtccattggtgagactgttgaagaagtcagtgacagtgggtttcttgacact
actccctcccttgctgtttctttgataggagatgattctctcatgcaggttcacccaaat
ggtattaggcatattagggaggatggccgtattaatgaatggagaactcctggaaagagg
agtatttcaaaagttggatcaaatacacttcaagtggttattgcactcagtggaggggag
cttatatattttgaaatggatgtaacgggtcagttgatggaggtggagaagcatgaaatg
tctggtgatgttgcttgtttggacattgctccagtacctgaaggcagacaaagatctcga
tttcttgcagttgggtcatatgacaagaccatccgcatcttatcacttgatcctgatgat
tgtatgcaggctctaagtgtacaaagcgtttcttcagctccagagtctcttctttttctt
gaagttcaagcatctgttggcggtgaggatggtgcagatcatcctgctagccttttcttg
aacgccggcttacagaatggtgtcatgtttagaactgtggtggatatggttacaggtcag
ctttctgattctcgttcccgattcttaggattgagagctccaaagctgtttcctattatt
gtgagaggcaagcgtgctatgctttgcttgtcaagtcgaccttggcttggttatattcac
caaggacatttccttttaacgcccctgtcatatgaaacccttgaatatgctgcctcattt
tcatctgaccaatgtgtggaaggtgtagttgctgttgctggtgaggccttgaggattttt
accattgaaagattaggagagacatttaatgaaactgtaattccattaaggtacacacca
aggaaatttgtgctgcaacccaaacgaaaacttcttgtgatgatcgagagtgatcaagga
gcattaactgcggaagagcgtgaagctgcaaggaaagagtgttttgaggctgctcaagct
ggggaaaatggtactggaagtgcagaccaaatggagaatggtggcgacgatgaagataaa
gatgatccactttcggatgagcattatggttatccaaaagctgaatctgataaatgggct
tcctgcatcagagttcttgatccaaggacatcaaatactacttgtcttttggagcttcag
gagaatgaggctgctttcagcatttgcaccgtaaatttccacgataaggaatacggaact
cttttagctgttggcacagcgaagggactgcaatttttgcccaaaaggactgtaactgct
ggatttattcatatttataggttcgtagaggatggaagatctcttgaacttctacacaaa
actcaagttgaaggtgttcctcttgctctatgtcaatttcaaggaagattacttgcaggg
ataggacctgtgctcaggctgtatgatttggggaaaaaacgattgttaagaaaatgtgag
aataagctattccctaacacaatcatctccattcatgcgtatcgtgatcggatttatgtt
ggtgatgtccaagagtctttccattattgcaagtataggcgtgatgaaaaccaactttac
atatttgctgatgattgcgttccaaggtggcttactgcatcataccacatagattttgac
accatggcaggtacagacaagtttggaaatatctattttgtgcggttgccacaggatgtt
tcagatgagatagaagaagatcctactggtgggaggatcaagtgggagcagggaaagctg
aatggagctcccaataaggtggaagaaattgtacagtttcatgttggtgatgtggtcaca
tgcttgcaaaaggcatctcttataccaggtggtggagagtgcattgtatttggaacagtt
atgggaagtgttggggcattacatgcctttacttcacgagatgatgttgatttcttttct
catttggagatgcatatgaggcaggatcacccacctttgtgtggaagagaccacatggca
tatagatctgcctattttcctgttaaggatgttattgatggggatctatgtgagcaatac
ccaacattgccaatggatttgcagagaaaaattgctgatgaattggacagaacccctgga
gagatactgaaaaaacttgaggaagtgcgaaataagattatttaa
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