Glycine max (soybean): 100775983
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Entry
100775983 CDS
T01710
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00100
Steroid biosynthesis
gmx00909
Sesquiterpenoid and triterpenoid biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100775983
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
100775983
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gmx01006
]
100775983
Enzymes [BR:
gmx01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100775983
Prenyltransferases [BR:
gmx01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100775983
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
100775983
NCBI-ProteinID:
XP_003537842
UniProt:
I1LJ81
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Position
11:complement(8528271..8535418)
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AA seq
413 aa
AA seq
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MGSLGAILKNPDDFYPLLKLKMAARNAEKQIPPEPHWAFCYTMLHKVSRSFALVIQQLGT
ELRNAVCIFYLVLRALDTVEDDTSIETDVKVPILIAFHRHIYDRDWHFSCGTKEYKVLMD
QFHHVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLAPDDLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKYEENSVKAVQCLNDMVTNALMHAEDCLTYMAALRDPPIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTTTMADVYGAFFDFASMLESKVDKNDPNATKALSRL
EAIQKTCRESGLLSKRKSYIVKDESGYGSTMIIVLVIMVSIIFSYLSASHQNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtttgggagcgattctgaagaatccagatgacttttaccctctgctgaagctg
aaaatggcggcgagaaacgccgagaagcagatcccgccggagccacattgggcgttctgc
tacacaatgctccacaaggtttctcgaagtttcgccctcgtcattcagcaactcggcacc
gagcttcgcaacgccgtttgcatattttatttggttctgcgagctctcgacaccgttgag
gatgatactagcatagaaacagatgtcaaggtgccaatactgatagcctttcaccgtcat
atttatgatcgtgattggcacttttcatgtggcacaaaggagtacaaagttctaatggac
cagtttcatcatgtttcaactgcttttctggaacttgggaagaactaccaggaagcaatt
gaggacattaccaaaagaatgggtgctggaatggccaaatttatttgcaaggaggtagaa
acaattgatgactatgatgaatattgtcactatgtggcgggacttgttgggctgggttta
tcaaagcttttccatgcgtctggttcagaagatctggctccagatgacctttccaattca
atgggcttgtttctacagaaaacaaacattattcgagattatctggaagacatcaatgag
atccccaagtcacgcatgttttggccacgacagatttggagtaaatatgttaacaaactt
gaggatttgaaatatgaggagaactctgttaaggcagtgcaatgcttaaatgacatggtc
actaatgctctgatgcatgctgaagattgcttaacatacatggctgctttacgtgacccg
cctatatttcgcttttgtgctataccccagataatggcaattggaacacttgcattatgc
tacaataacattgaggtcttcagaggtgtagttaaaatgaggcgaggtttaactgccaaa
gtgattgaccgaactacgactatggctgatgtctatggtgctttctttgattttgcttct
atgttggagtccaaggttgacaaaaatgatcccaatgcaactaaagcattgagcaggctg
gaagctatacagaaaacttgcagagaatctggtctcttgagtaaaaggaaatcttacatt
gtgaaggatgaaagtggatatggctcaaccatgattatcgtactggtcatcatggtttcc
atcattttttcttatctgtctgctagccaccaaaataactag
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