Entry |
|
Name |
(RefSeq) nucleolar protein 6
|
KO |
K14544 | U3 small nucleolar RNA-associated protein 22 |
|
Organism |
gmx Glycine max (soybean)
|
Pathway |
gmx03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:gmx00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100776157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:gmx03009]
100776157
Ribosome biogenesis [BR:gmx03009]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100776157
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
11:complement(5138467..5146506)
|
AA seq |
1050 aa
MDSDAIAKDSTELKLTELLKEVTVDHSHQFSKLVDDTVSAIKTSIDKIPNDFKVTADLAS
RFVTDIGADKVEFKFKKPAFVKIGGSCSIQSLAKPEVNVDLIIRLPKECFHEKDYLNYRY
HAKRCLYLCLVKKYLEKSPSIDRVEWSTLQNEARKPLLVVYPAAKLVEVPGFFVRIIPSA
KAIFSTAKLNLKRNNIHNLSNGTSLQATPKYNSSILEDMFIEDAEFINNYYLGWKELKEA
LILLKVWARQRSSIYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRITLNFIATSEL
WSRGLYFPKEGQSNITKEQRMQLKESFPVVICHPSGGFNLAFRMSRIGFTRLQNEATLTL
RCMEKCRDCGFEEVFMTKIDYAVKYDYCMRINLKGKKEVFASGFCLDDECWRSYEDKIHG
ILSKGLNDRAQFIQVTWRNTHCQWSVDDGLSVLDKVPLFVGFSVSSLEKAFRMVDIGPNA
ESKEEALEFRKFWGEKADLRRFKDGRIAESTVWESEQWARHLVLKRIIDHVLSRHLSLSK
ENIVVVVDQLDFSLLHGAGDPISYSGSLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFR
FTSVFPPEPHLLANEKNESLRLNKLVPSCIQPLEVMIQLEGSGNWPMDEIAIEKTKCSFL
IQIGVSLQKMWGMTCTATEDNVDVLMSGYLFRLKILHERGLSLLNKEIGSDQAKRIPSAD
KKLFIHSQHANMINGLQSRYPIFGPVVRLAKRWAASHLFSACLLEEAVELLVAYLFLNPL
PYDVPCSRITGFLRFLRLLSHYDWTFSPLVVDINHDLSPSDEKEINDNFLLKRKGQGENG
QSVGPAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLAKLTFQEEIGPYRWEC
LFRTPLNNYDAVVILHKDKLPYPQRLLFPSEVNHGTHVAEGHASKCFQPFLLPKDLKGRP
EELKNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYPSKKRKREDVV
DPCKVLKAVGEVGKGFVRSIYFLKPPKLMN |
NT seq |
3153 nt +upstreamnt +downstreamnt
atggactccgacgctattgccaaggactcaacagagctaaagttgaccgagctattgaag
gaggtcaccgtagaccactcacatcagttctccaagctcgtcgacgacaccgtttccgcc
attaaaacctccatcgacaaaatccccaacgatttcaaggtaactgctgatttagcatcg
cgctttgttacggacattggcgcagataaggtcgagttcaagtttaagaagcccgcgttt
gttaagattggtggaagttgctccatacagagtctcgcgaagcctgaagttaatgtcgat
cttattatcaggttacctaaggaatgcttccatgagaaggattatttgaattacagatat
catgccaagaggtgtctctatctctgcttggtgaagaagtatttggagaagtctccatct
attgatagggttgaatggtccactctgcagaatgaggccagaaaacccctgctcgttgtg
tatccagctgctaagcttgttgaagttcctggtttttttgtaagaattattccatcagct
aaggctatatttagcactgcaaagttgaacctgaaacgcaacaacattcataatttgagt
aatgggacttctcttcaggctacaccaaagtacaattctagtattttggaagacatgttt
atagaggatgcagagtttatcaacaactattatcttggatggaaggaactaaaagaggct
ttaatcctgcttaaggtttgggctcgacaaagaagttcaatatatgttcacgattgcctg
aatgggtttttgatttctgtcattttggcatatcttgcttctaagcaacatattagcaat
tcaatgaaagcaactgaaataattcgcatcacgttgaactttattgccacctcagagctg
tggagccgaggtctctactttccaaaggaaggccagagcaatattacaaaagagcaaagg
atgcaacttaaagagtcatttccagttgtcatatgtcatccatctggaggattcaatttg
gcctttcgaatgtctaggattggttttactcggcttcaaaatgaggctactttgacactt
aggtgcatggaaaagtgtagagattgtggatttgaggaagtttttatgaccaagattgac
tatgctgttaaatatgactattgtatgagaataaatttgaaaggaaagaaggaggtattt
gcatctggattttgtttggacgatgagtgctggagatcatatgaggataaaatacatggt
attttatctaaagggttgaatgatagagcacaattcattcaagttacatggagaaataca
cattgccagtggagtgtggatgatggcttgtcggtacttgataaagtgcccttgttcgta
ggattttcagtgagttctttggagaaagcatttaggatggttgatattggcccaaatgct
gaaagtaaagaagaggctcttgaatttcgaaagttttggggagaaaaagcagatcttaga
agatttaaagatggtagaattgcagaaagcacggtgtgggaaagtgaacaatgggcaagg
catcttgttttaaaaagaataattgatcatgtacttagtcggcatctttctctatccaag
gaaaatattgtagttgttgtggatcaacttgatttctctttgcttcacggagctggagat
cctatatcatactctggaagtttgcttggggcatttgatgttttatcaaagcgtttgcgt
cttattgaagacctccctttgaaggtgtctagtgtacagcctttagactctgctttcagg
tttacatcagtcttccctcctgaacctcatcttctagcaaatgaaaaaaatgaatctctc
agactgaataagttagttccgtcatgcattcaaccactggaagttatgattcagctggaa
ggttctgggaactggccaatggatgaaatcgcaattgaaaaaacaaaatgtagtttcctt
atccaaattggagtaagtcttcaaaagatgtgggggatgacatgtactgccactgaggat
aatgtggacgtgttaatgtctggatatttatttcgtctaaaaattttgcatgagaggggc
cttagtttgctcaacaaggaaattgggagtgatcaagctaagcggattccttctgctgac
aagaaactttttatccatagtcagcatgctaacatgatcaatggattacaaagtcgttat
ccaatatttggaccagtagttagacttgcaaaacgatgggctgcttcacatctattttca
gcttgcctgttagaggaggctgttgagctattggttgcatatctttttcttaatcctttg
ccttatgatgttccctgctcacggatcactgggtttttgagattcctgcggttactctca
cactatgattggactttctctccgctggttgttgacataaatcatgacttgagtccaagt
gatgagaaagaaataaatgacaactttttgctaaaaagaaaaggtcagggagaaaatgga
caaagtgtaggaccagcaatgttcttagctacagtttatgataaagaatctgaggcttgg
actggattatcacctagtggaatggaacttaaaaggttagttgcatatgcccgaagcagt
gccaatttgttggcaaaactcacatttcaggaagagattggtccatataggtgggagtgt
ctttttagaactcctttaaacaattatgatgcagtagttattctccacaaggacaaacta
ccgtatccccaaaggcttctcttcccatcagaagttaatcatggaacacatgttgcagaa
ggacacgccagcaagtgtttccaaccctttttgttgcctaaagatttgaagggcaggcca
gaggaacttaaaaataagttgctggtagattttgatccatcaaagtgctttatcagagat
ttaaagcaagaattctcaaccacattccaagtatggcatgattatctgggaggtgatgtt
atcggcctaacatggggagagtcatatccttccaagaagcggaagcgcgaggatgtagtt
gacccctgcaaggtgttaaaagcggtgggggaagttgggaaaggatttgtgaggagtata
tactttctcaagcccccaaagctcatgaattaa |