Glycine max (soybean): 100776353
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Entry
100776353 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100776353
KO
K14962
COMPASS component SWD2
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100776353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100776353
03036 Chromosome and associated proteins [BR:
gmx03036
]
100776353
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100776353
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
100776353
COMPASS/SET1 complex (yeast)
100776353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
WD_LRWD1
Methyltransf_13
Motif
Other DBs
NCBI-GeneID:
100776353
NCBI-ProteinID:
NP_001241111
UniProt:
C6TM83
LinkDB
All DBs
Position
19:13996777..14007073
Genome browser
AA seq
334 aa
AA seq
DB search
MTASLTELDDDLVRSMAIGAVFSDFGGMIHSIDFHRKDDLLVTASEDDSVRLYDIANAKL
LKSTYHKKHGTDRICFTHHPSSVICSSKYTLESTGESLRYLSMYDNRCLRYFKGHKQRVV
SLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGF
SLEPSPGTPIEATFTPDGKYMVAGSGSGTMQVWSIETKNEVACWTSHIGVPSCLKWAPRR
AMFAAASSVLTFWIPNNDSKLETQYGGTDAEAGP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgtcgctcacggagcttgacgacgatttggttcgaagcatggccataggagcc
gttttctccgacttcggtgggatgatacattcgattgatttccatcgaaaggatgattta
cttgtcacagctagtgaggatgattcggtgcgactttatgacattgctaatgctaagtta
ttgaagagcacttatcataagaaacatggtactgatcgtatatgttttactcatcatcca
agctctgttatatgctcttcaaagtacactttggagtctactggagaatcattgcggtat
ttatcaatgtatgataatcgctgcttacgatacttcaaagggcataaacagagagttgtt
tctctctgcatgtctccaatcaatgatagcttcatgtctggttctctagaccacagtgtt
aggatatgggatcttcgggtaaatgcttgccagggcatcttacatctacgtggtagaccc
gctgttgcgtatgaccaacaaggcctggtctttgctgtagcaatggaagggggagctatt
aaattatttgattctcgttcttatgacaagggtccctttgacacctttctagttggtggt
gacacagccgaagtttgtgatatcaaattcagtaatgacggcaaatcaatgcttctgact
actactaataacaatatttatgttcttgatgcatatggaggagagaagcgttgtggattt
agtttggaaccatctcctggtaccccaatagaggctacatttaccccagatgggaagtac
atggtggcaggatctggaagcggaaccatgcaagtttggagtattgagaccaaaaatgag
gtggcatgttggaccagccatattggtgtgccttcgtgcttgaagtgggcccctcgcagg
gccatgttcgctgctgcttcaagtgttctcacattttggatacccaataatgattcaaag
ctggaaacccagtatggtggcacagatgctgaagctggaccttaa
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