Glycine max (soybean): 100776358
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Entry
100776358 CDS
T01710
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100776358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100776358
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100776358
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100776358
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Ortholog
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GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
EXOSC1
ATPgrasp_YheCD
S1
Motif
Other DBs
NCBI-GeneID:
100776358
NCBI-ProteinID:
XP_003554237
UniProt:
I1N9E1
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All DBs
Position
19:complement(41749929..41752037)
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AA seq
327 aa
AA seq
DB search
MREIQLPLSQTQKVRLQKALEQLESLSTKVNSDASVIIADSIHVNHEDGVLKGHGTADLN
GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAVLL
LSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ
LLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMIEDQVSQSDSQVLF
PNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLSMNLDI
HDMLGSEFCVLVAEKEAERRSSMKKRR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatacagttacccttaagccaaacacagaaggttcgtcttcagaaggctctg
gaacagttagagtctctgtcaacgaaggtgaattccgatgcttcggtaatcatcgccgat
tccatccacgtcaaccacgaagatggcgtcctcaagggacacggaaccgccgacctcaac
ggcgaagtcgtcgccaccctctgcggcgtcgtcgagcgcgtcaacaaacttgtctacgtt
cgcgcgttacgctccaggtataaacctgaggttggtgacattgttatagggcgtgttgtt
gaggttgctcagaagcgttggagattggagataaattacaatcaggatgcagttttgctg
ctctcttctatgaacatgcctgatggtgttcagaggcggaggacagctgtggatgagcta
aacatgcgctgcattttcgaggagaatgatgttgtttgtgctgaagttcgtggtttccag
catgatggcttacaccttcaagcaaggagtcggaaatatggaaagcttaatagaggtcaa
ctgcttactgtcccaccttatttagtgaagagacaaaaacaacatttccatcatcttgag
gagtttggtattgatttgatacttggctgtaatggattcatatgggttggggaacatgtt
gaagccaaagatgacatgatagaagatcaagtgagccaatctgattcacaagttttattc
cctaataaaaattgtgtcagtcttgaagaacaagagaaaaattatacaatattggagaca
agaaaatacatatccagagctgctaatgctgttagagtattgtcaaccttaggcttcaat
attacattggaaatcatcaagggaattattgatctaagcctatctatgaatcttgatata
cacgatatgcttggttctgagttttgtgttctggttgccgaaaaagaggctgaaaggaga
agctcaatgaaaaaaaggcggtag
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