Glycine max (soybean): 100776369
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Entry
100776369 CDS
T01710
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100776369
Transcription machinery [BR:
gmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
100776369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
HTH_11
GerE
Motif
Other DBs
NCBI-GeneID:
100776369
NCBI-ProteinID:
XP_006578934
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Position
4:complement(49497790..49501079)
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AA seq
509 aa
AA seq
DB search
MGVVTVSGSASRTPLGFNTKFSTHRLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKK
TQKKRIGKSNKLPKRESSPSSMDVDYNEAAAMLENIYKLSPASHTGNAECIDDKIKRVSR
RGKKVVDESEEKELKGDRVVRRQNKNKKAKRLTLDQRISLKNNKRGDEVIPTRKKRNFRN
RIEKIEELIREYSVSNDFISMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQKE
LAREPADGELADATNMSITQVKKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRF
QDLCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSSFIRVPFGLESVRAE
IQKAKTELTFKLQRSPTEEEIIERVHISPERYHDIIKASKSILSLNSRHTTTQEEFINGI
VDDDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNIS
REMVRKHEVKALMKLNHSARLDYLRRYVV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctggctcagcttctcggactccattaggattcaatacgaag
ttttccactcatcgtttgaagagacctttaattgtagcatttaaaggggataagcacaat
gactcagctttggttgcaacacaagagaaaattcctgtgccggttgaaacggcaaagaag
acgcagaaaaaaaggataggaaaaagtaacaaactacctaagagagaaagttctccatct
tccatggatgtggactacaatgaagctgctgctatgcttgaaaatatatacaaactcagc
cctgcttctcataccggtaatgcagaatgtatagatgataaaatcaaaagagtctctcgg
agagggaagaaggttgttgatgaaagtgaagaaaaggagttaaagggtgatagggtggtc
agaaggcagaacaagaacaagaaagctaaacggttgactcttgatcagagaatttcatta
aagaataacaaaagaggggacgaagtcattccgactcgaaagaaaagaaactttaggaac
agaattgagaagattgaagaacttattagggaatattcagtatcaaatgattttatcagt
atggattggaaaagaatgagaatacctcccgttctttcttcttcagagcatgcttggttg
ttcaaattgatgcaacctatgaaggcactgcttcaagtgaaagaagatttacagaaggag
ctagcaagagaacctgcagatggtgaactagctgatgcaacaaacatgagcattactcaa
gtaaagaaagcaatagatgttggtcaagctgctagaaacaaactcataaagcacaatctc
cggcttgtcttgttcgtgatcaacaaatattttacagattttgcaagtggccctaggttt
caagatctttgtcaggcaggagtaaagggacttataacagcaattgatcgttttgagcca
aacaggagatttcggttatcaacatatagtttgttttggataagacatgctatcattcgt
tcgatgactctctcaagcttcatacgtgttccctttggacttgaatccgttcgagcagaa
atccaaaaggctaaaactgagttaacatttaagcttcagaggtcaccaacagaggaagaa
ataatagaaagagttcatatatcccctgaaagataccatgacataattaaggcatcaaaa
tccattctttcgctgaactcaagacatacaactacacaagaggagttcattaatgggatt
gttgatgatgatggtgttaatggtgataataggaagcaacctgctctactaaggcttgct
cttgatgatgtgcttgattccctgaagccgaaggagagcttggtgatcagacagagattt
ggacttgacggcaagggtgacagaacgttgggagaaattgctgggaatttgaatatatct
agggaaatggttagaaagcacgaagtcaaggctcttatgaagctcaaccattcagctcga
ttggattatcttcgccgttatgttgtataa
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