Glycine max (soybean): 100776547
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Entry
100776547 CDS
T01710
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100776547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100776547
03036 Chromosome and associated proteins [BR:
gmx03036
]
100776547
Enzymes [BR:
gmx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100776547
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100776547
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
100776547
Noncanonical PRC1 (PRC1.1)
100776547
Noncanonical PRC1 (PRC1.3/1.5)
100776547
Noncanonical PRC1 (PRC1.6)
100776547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-UDP
zf-RING_11
zf-RING_6
zf-C3HC4_5
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100776547
NCBI-ProteinID:
XP_003539538
UniProt:
K7LW36
LinkDB
All DBs
Position
12:38041167..38052610
Genome browser
AA seq
500 aa
AA seq
DB search
MPAQKRSLPDSLDEGDTSQQNLFHSRHAKQQQQDQSQEHDEDENEDEEGEDGEEEEGEEE
GEGEGEEDEEEEEEEEVEEAAQHDNNDKEKPQDSDETPSSGSEEKPEFVYVELLEIRKDV
QCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDAL
IAALYPDIEKYEQEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGAFVTRPQ
RNQRNIHSRRQTQAIEGSEDNEEENDNNEKDSSSADERSTEHRQRRRKRWARVRPSQPSS
SMASPDGGCNDSDMDISKENRGISRQVSKHGKLTWGRGGFRSNTRHGSGGGSNNKSSRSS
RLSKFVDHLRNLDENTDEFDVHLMLVSLDQLSTPSLQQPYLCCRPTLSVKHLYEHVARQT
PLPVEGIEIVAVKGCCSTNCDKSADENSALAYDELSKLVIDPHKDELEILQGHETLAGLR
SKCISKMGHLIIAYKQKEVS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaagcgctctctgcccgactctctcgacgaaggggacacttcgcagcag
aacctcttccattctcgacatgcgaagcaacaacaacaggaccagtcgcaggaacacgac
gaggatgagaacgaagacgaagaaggagaagatggagaagaagaagaaggagaagaagaa
ggggaaggggaaggagaagaagatgaggaggaggaggaagaagaagaagtagaagaagcg
gcgcaacatgacaacaacgacaaggaaaaaccacaggattccgacgaaaccccatcttct
ggctctgaagaaaaacccgaattcgtgtatgttgaacttctggaaattcgtaaagatgtc
caatgcccaatttgccttggcattattaagaagacaagaactgttatggaatgcttgcac
cgtttttgcagggaatgcattgataaatcaatgcgactagggaacaatgaatgccctgct
tgtcgcacacattgtgccagtcgtcgttccttgagagacgatccaaattatgatgccctc
attgccgctttatatccagatattgagaagtacgaacaagaggagcttgaatttcgtgaa
gaggagaagaaccgcaataagcagattcaagcttcaatagcaaaagtagttcaacggcaa
tctgaagcattggttaagagacgtaaagacacaccaggtgcatttgtaactagaccgcag
cgtaatcagcgaaacattcattctaggagacaaactcaagcaattgaaggatctgaagat
aatgaggaggaaaatgacaataatgaaaaggactcatcttcagctgatgaacgaagtaca
gaacaccggcagagaaggagaaagagatgggctagagttcgcccctctcaaccctcatca
tccatggcaagtcctgatggtggatgcaatgatagtgatatggatataagtaaagaaaat
cgtggaatttcaaggcaggtgtcgaaacatggaaagcttacatggggaaggggtggtttt
agaagtaacactcggcatggcagtggtggtggtagcaataacaaaagttctcgcagtagt
cgattgtctaagtttgttgaccatctccgcaacttggatgaaaacactgatgagtttgat
gtccatctcatgcttgtttctcttgaccaactaagtacaccaagtttgcagcaaccttac
ctttgctgtcgaccaactttgtctgtcaagcacctttatgaacacgttgctcgtcagaca
cctttgccggttgaaggaattgagatagtggcagtcaaaggatgctgcagtacgaactgt
gacaagtcagctgatgagaattcggcccttgcatatgatgagctatcaaagctggttata
gatccacacaaagatgaactggaaattttgcaaggacatgagactctggcagggcttaga
tccaaatgcatatccaagatggggcatttgattattgcatacaagcagaaggaggtatca
tag
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