Glycine max (soybean): 100776562
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Entry
100776562 CDS
T01710
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100776562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100776562
03036 Chromosome and associated proteins [BR:
gmx03036
]
100776562
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100776562
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100776562
PBAF complex
100776562
GBAF(ncBAF) complex
100776562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100776562
NCBI-ProteinID:
XP_003524614
UniProt:
K7KP05
LinkDB
All DBs
Position
5:10454151..10457567
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AA seq
543 aa
AA seq
DB search
MSVNNNNPSKGIGASSSTFGNAGIPSNSIPSNPGFSQSQGQAQIPVGFQGQFPLSQAHAI
VQAQSKAQAQAQAQAAAAAHAQLQAHLQAQGLSLNQNQAGGLGVSSPSISTPGNASGKRI
PMKPPMRPVGFSPPNSFSPLRPMELTPAARRKKQKLPEKQLQDKVAAILPESALYTQLLE
FESRVDAALARKKADIQEALKNPPCIQKTLRIYVFNTFANQIRTIPKKPNVEPPTWTLKI
VGRILEDGVDPDQPGVVQKSSPLYPKFSAFFKRVTISLDQRLYPDNHIILWENARSPAPH
EGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPALTEVLGIEVDTRPRIVAAIWHYVKARK
LQNPNDPSYFHCDPPLQKVFGEENMKFTMVSQKISSHLFPPQPILLEHKIKLSGNSPAGT
ACYDVMVDVPFPIQRELSALLANVEKNKDIETCDEAICGIIRKIHEHRRRRAFFLGFSQS
PVEFINALIESQSRDLKLVSGEPSRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAP
GST
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaacaataataacccttctaagggcattggggcctcttcctcaacctttggc
aatgctggaataccctccaattctataccttcaaaccctggtttttcacagtcccaagga
caagcccagattcctgttggttttcaagggcagtttccactgtcccaggcccatgctatt
gtccaagctcagtccaaggcccaggcccaggcccaggcccaagcagcagctgcggcccat
gctcaactccaggctcatttgcaagctcaggggttgagtcttaatcagaaccaggctggt
ggtttgggtgtgtcgtcgccgtcgatttccacgccgggtaatgcgagtgggaaacggatc
cctatgaaaccccccatgcggccggttgggttttcccctcccaacagcttctcgcctttg
agaccgatggagctcacgcctgctgctcggaggaagaagcagaagctccccgagaaacag
ctgcaagataaagtggctgctattctgcccgagtctgcgttgtatacgcagcttctcgag
tttgagtctcgcgttgacgctgcacttgctagaaagaaggctgacatccaggaagcgctc
aaaaacccgccatgtattcagaaaactcttcgtatttatgtatttaatacttttgctaat
caaattcgcacgattccgaagaagccaaatgtggagcctccaacctggacgctaaagata
gttgggaggatattggaggatggtgttgaccctgatcagccaggagtagttcagaagtcg
tctcctttgtatccaaagttttcagctttctttaaaagagtaaccatttctttggatcag
agactttatcccgataatcacattattttgtgggagaatgctcgatcacctgctccacat
gaaggttttgaagtaaagaggaaaggggataaagaatttacagtgaatatacggctggaa
atgaattatgtgccagagaagtttaagctttcaccagctttgacagaagttcttggtatt
gaggttgatacccgcccgagaattgttgctgcgatctggcactatgtgaaggctaggaaa
ttgcaaaacccaaatgacccttcttactttcactgtgatccgcctcttcagaaagtattt
ggagaagaaaatatgaagtttacaatggtttctcagaaaatatcatctcatttgttcccc
ccacagcctatacttttggagcataagattaagctctctggaaacagtcctgctggtact
gcttgttatgatgtgatggttgatgttccttttcctattcagagggagttgtctgcttta
ttggctaacgtggaaaagaacaaagatattgagacatgtgatgaagcaatatgtggaatc
attagaaaaatccacgagcaccgtaggagacgggcattctttcttggtttcagtcaatcg
ccagtagaatttattaatgcattgattgaatctcaaagcagggatctgaaacttgtatcc
ggagaacctagtcgcaatgcagaaaaagagcgtcgttcagatttcttcaaccaaccatgg
gttgaagatgctgttattcgttacctgaatcgcaaaccagctgcgggaagtgatgctcca
ggaagcacatga
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