Glycine max (soybean): 100776653
Help
Entry
100776653 CDS
T01710
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X2
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100776653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100776653
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
100776653
DNA repair and recombination proteins [BR:
gmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
100776653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
DUF2972
Motif
Other DBs
NCBI-GeneID:
100776653
NCBI-ProteinID:
XP_003518153
UniProt:
I1JGE1
LinkDB
All DBs
Position
2:complement(37938415..37943866)
Genome browser
AA seq
507 aa
AA seq
DB search
MGSKRPFSNSSKPLSPFVEDTKNVKLKGLEASPGSKKLVVEENDVNSYSIEIQRLRNDPT
IVDTMTVHELRKTLKRFKVPAKGRKDDLLSALKSFMDNNMCEQDSHLQEKQGLLISSENA
SVEVKAKTVLDEDHIENVNETPEISELNQGKRRLNQSESERKTIKVTTKKKVSLKSDEDS
DFKPSRAKKKVSSDFASIVVQSEEISTATIQTEPWTVLAHKKPQKGWIAYNPRTMRPPSL
AQDTKFVKLLSWNVNGLRALLKLEGFSALQLAQREDFDVLCLQETKLQEKDIEEIKQRLI
DGYANSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGIPDHDSEGRLVTAEFDTFYLICGY
VPNSGDGLKRLSYRVTEWDPSLSNYLKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSA
GFTDEERKSFAKNFLSRGFVDTFRRQHPGVIGYTYWGYRHGGRKFNRGWRLDYFLVSESI
ADKVHDSYILPDVTGSDHCPIGLVVKL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggtctaaaagacccttttcaaattcatcaaaacccttgtcaccatttgttgaggac
acgaagaatgtgaagcttaaagggttggaagcaagccctggttccaagaagcttgttgtt
gaggagaatgatgttaatagctattcgattgagattcagaggttaagaaatgacccaaca
atagtagacacaatgactgttcatgaactccggaaaaccttgaagagatttaaagtccct
gccaaaggtcgtaaagatgatcttttgtctgccttgaagagtttcatggacaataacatg
tgcgaacaagattctcatttacaagaaaaacaagggcttttaatttcttctgaaaatgca
tctgtagaagtgaaggctaaaacagtattggatgaagaccatattgaaaatgtcaatgaa
actccagagatatctgaacttaaccagggtaagagaaggttaaaccaatcagaatctgag
agaaaaactatcaaagtgacaaccaagaagaaagtttcattgaaatcagatgaggattca
gattttaagccttccagggcaaagaaaaaagtatcttcagattttgctagcattgttgta
cagtcagaggaaatcagtacagctactattcaaactgaaccatggacagttcttgcccac
aagaagcctcaaaaaggttggattgcatataatcctagaactatgagacccccatcgctt
gctcaggatacgaaatttgtcaagcttttgtcatggaatgtcaatggattgagagcattg
ctaaaattagaaggattctcagcacttcaacttgcccaaagggaagactttgatgtattg
tgtttgcaagagactaaactgcaggagaaggatattgaggaaatcaaacagcgtctaata
gatggttatgctaacagcttttggacatgtagtgtttctaagcttggttattctggaaca
gcaattatctcaaggatcaagccactttcagttagatatggtctaggtataccagatcat
gatagtgagggtagacttgtaactgctgagtttgatacattttatttgatatgtggatac
gtccctaattctggagatggcttgaaaagattgtcttacagggtgactgaatgggatcca
tctctcagcaattatttgaaagagctggagaagtcaaaacctgtaattttgactggtgat
ctaaattgtgctcatgaagagatagatatatacaaccctgctggtaacaagagaagtgct
gggtttacagatgaagagaggaaatcatttgcaaagaacttcttatctaggggatttgta
gatacctttagaaggcagcatcctggtgttattggatatacatattggggttaccgtcat
ggtggacgcaagtttaacagagggtggcgtcttgactatttccttgtctcagaatccatt
gctgacaaagttcacgattcatacattcttcctgatgttaccggtagtgatcattgtcct
attggccttgttgtcaagctttag
DBGET
integrated database retrieval system
