Glycine max (soybean): 100776762
Help
Entry
100776762 CDS
T01710
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gmx
Glycine max (soybean)
Pathway
gmx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100776762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100776762
03009 Ribosome biogenesis [BR:
gmx03009
]
100776762
04131 Membrane trafficking [BR:
gmx04131
]
100776762
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100776762
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100776762
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100776762
Membrane trafficking [BR:
gmx04131
]
SNARE
SNARE associated proteins
Others
100776762
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100776762
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100776762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
CDC48_2
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
ATPase_2
AAA_28
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
Viral_helicase1
AAA_7
NACHT
Vps4_C
DUF815
NB-ARC
TsaE
ResIII
AAA_24
Zeta_toxin
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
100776762
NCBI-ProteinID:
XP_003528141
UniProt:
I1KCD7
LinkDB
All DBs
Position
6:complement(15224536..15229382)
Genome browser
AA seq
814 aa
AA seq
DB search
MADPTSSNPDKDQSSSDSKCEKKDYSTSILERKKSPNRLVVDEAINDDNSVVTLHPETME
KLHFFRGDTVLIKGKKRRDTICVVLADEQCDEPKIRMNKVVRANLRVRLGDVVSVHQCPD
VKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGGMRSVEFKVIE
TDPGEYCVVAPDAEIFCEGEPIKREDEERLNEIGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRK
AFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRSHVVVIGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDNVDLEKVGRDTHGYVG
SDLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALSSSNPSALRETV
VEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGS
SVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLP
DESSRLQIFKACLRKSPISKDVDLAALARFTHGFSGADITEICQRACKYAIREDIEKDIE
KERRKRENPEAMEEDDTDEVPEIKPAHFEESMKFARRSVSDADIRKYQLFAQTLQQSRGF
GSEFRFPDRNENTAADASDPFSSVTAEGDDDLYS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaacctcatctaaccctgataaggatcaatcctcttcggactcgaaatgt
gaaaagaaggattattccacatcaatattagaacgcaagaagtctcctaaccgacttgtt
gttgatgaagcaattaatgatgataattccgtggttactttgcaccctgaaacaatggag
aagcttcattttttccggggggacactgttctgataaagggaaagaagcgaagggacaca
atttgtgttgttcttgctgatgaacaatgtgatgaaccaaaaataaggatgaataaggtt
gttcgggctaatcttagagtgcgacttggcgatgttgtctctgtccatcaatgtccagat
gtgaagtacgggaaacgagttcacatccttccaatcgatgacaccattgagggtgtaact
ggcaacttgtttgatgcatatttgaagccatactttatggagtcataccggccagtgagg
aaaggggacttgttccttgttcggggtgggatgcgcagtgttgaattcaaggtaatagag
actgatcctggtgaatactgtgttgtggcacctgatgctgaaatcttctgtgagggagag
ccaatcaagcgggaagatgaagagagactaaatgaaattggctatgatgatgtcggtggt
gttaggaaacaaatggctcaaattcgtgagctggtagaacttccacttagacatccgcag
ctcttcaaatcaattggagttaagcccccaaaaggaatcttgctttatggaccacctggt
tcaggaaagactctgattgcaagagcagttgctaatgagactggtgcattcttttttttg
attaatggaccagaaatcatgtcgaagctggccggtgagagtgaaagcaatctgaggaag
gcatttgaagaagctgaaaagaattccccttctatcatttttattgatgaattagactcg
attgctccaaagagagaaaagacacatggtgaagtggagaggcgtatcgtttcacaactt
ttgactcttatggatggcctcaagagccgatcacacgttgtcgttattggagccacaaat
aggccaaatagtattgatcccgctttgagaaggtttggaaggtttgatcgggagattgac
attggtgtaccagatgaagttggaaggttggaggttcttagaattcatacaaagaacatg
aaactttcagacaatgttgatcttgaaaaagttggcagagatactcatggttatgttgga
tcagatcttgctgctctttgcacagaggctgcactacagtgtatccgggagaaaatggat
gtgattgacttagaggatgaaacaattgatgctgaggtgttgaattccatggctgtgacc
aatgaacactttcaaactgccttaagttcttcaaacccatctgccctgcgtgaaacggtt
gtggaggttccaaatgtttcctgggatgatattggaggcttagagaatgtcaagagggag
cttcaggagactgttcaatacccagtggaacatcctgagaagtttgagaaatttggcatg
tcaccttccaaaggtgttctcttttatggacctcctggctgtggtaaaaccctgcttgca
aaagcaattgctaatgagtgccaagccaactttataagtgttaagggacctgagttgctg
acaatgtggtttggtgaaagtgaggcaaatgttcgcgagatatttgacaaggctcggcag
tcagctccatgcgtgcttttctttgatgaacttgactctattgcaactcagcgaggcagt
tctgtaggggatgctggtggtgctgcagatagggtgttgaaccaactgttaacagaaatg
gatggtatgacagctaagaaaacagttttcatcattggggcaacaaacagaccagacatt
atagaccctgcattgctcaggccgggacgtctggatcaattgatttacatccctttaccg
gacgaaagttcacgtcttcaaatcttcaaggcatgcttgaggaagtcaccgatctcaaag
gatgttgaccttgcagctcttgcccgttttactcatggattcagtggtgcagacatcact
gaaatttgtcaacgagcgtgcaaatatgccattagggaagatattgaaaaggatattgag
aaggagagaagaaaaagagaaaaccctgaagccatggaagaagatgacactgatgaggtc
cctgagataaagcctgcccactttgaagagtctatgaagtttgctcgccggagtgtcagc
gacgctgacatcaggaaataccagctctttgctcagaccttgcaacagtctcggggattc
ggatccgagtttcggtttccagatcgaaacgagaacactgcagcagatgcctcagaccct
ttctcatctgttacagctgagggagatgatgatttgtacagttag
DBGET
integrated database retrieval system
