Glycine max (soybean): 100777041
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Entry
100777041 CDS
T01710
Name
(RefSeq) vacuolar sorting protein 3
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100777041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100777041
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100777041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
CNH
Vps39_1
TPR_Vps41
CooC_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
100777041
NCBI-ProteinID:
XP_006576684
UniProt:
I1JMK1
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All DBs
Position
3:complement(31004461..31017403)
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AA seq
1000 aa
AA seq
DB search
MVQVESNSSMSRVVLEPHAQFDLTAHSRASSIRSLSISHSKRHRTTLLYVGTHSGTLFSL
SAEDSNDSDDAVLRKLSFLRSVSVSDAAVESISVIEEFRKLLLLSDGTLFLVDSELSNRA
TKLSFPKGVSLVTRRRLRNNGGESEGFGSGLGSGSGSGSGLGLFQKLRMNSMKEGEVQSE
TGGGCVFAIVVGNRLILAELVLGNRNGKSERDDGGALVVLKEIQCVDGVVSAMVWLNDSI
VVGTVNGYSLISCVTGQSSVIFSLPDVSWPPRLKLLHKEWRVLLLVDNVGVIVDPHGQPV
GGSLVFRHGLDSMGEIDSYVVVVSDGKIGLYHKRHGGCVQVLPFGGEGVGRCVVASEEDK
GGRLVAVATATKVVCYQKLPSVEQIKDLLRKKNYKGAISLVEELESEGEMSKDLLSFVHA
QVGFLLLFDLHFKEAVDHFLLSETMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHPPPAPL
EDVIDDGLMTIQRASFLRKAGVETIVDNDLFLNPANRADLLESAIKNISRYLEACREKDL
TESVREGVDTLLMYLYRALNSVEDMEKLASSINWCVVEELEQMLEESGHLRTLAFLCASK
GMSSKAVHIWRILARNYSSGLWKDPSLENNTQNSGGNLISGRVIAAAEASKILEESSDQE
LILQHLGWIADINQVLAVNVLTSDKREIELSPDEVVTTIDPQKAEILQRYLQWLIEDQDC
NDTQLHTLYALSLAKSAIEAFESENISENLDSGNIETRSLAMLKNSIFQIPVRERLQIFL
QSSDLYDPEEVLDLIEGSELWLEKAILYRRLGQETLVLQILALKLEDSEAAEQYCAEIGR
ADAYMQLLEMYLDPQDDKDPMFTAAVRLLHNHGESLDPLQVLEKLSPDMPLQLASDTLLR
MFRARVHHHRQGQIVHNLSRAVDIDARLSRLEERSRNVQINDESLCDSCDARLGTKLFAM
YPDDTVVCYKCYRRQGESVSVSGRNFKEDILIKPGWLVSR
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggttgaaagcaacagcagcatgagccgcgtggtgctggagccccacgcgcag
ttcgacctcaccgcccactcacgcgccagctccattcgatccctctcaatctcccactcg
aaacgacaccgtacgactcttctctacgtcggaactcactccggaaccctattttccctc
tccgccgaggactccaacgacagcgacgacgccgttttgcgcaagctctcgttcctgaga
agcgtttcggtcagcgacgccgccgtcgagtccatctcggtaatcgaagagttccggaag
cttctgttgctgtccgatgggactctgttcttggtcgactccgaactctcgaatcgcgcc
acgaaattgagtttcccgaagggggtttcgttggtcacgaggagaaggctcaggaacaac
ggtggagaatccgagggtttcggttcgggtttaggttcaggttcaggttcgggttcgggt
ctaggattgtttcagaaattgagaatgaactcaatgaaggagggtgaagtgcagagtgag
acaggtggtggttgtgtttttgcaattgttgttgggaacaggctgattctcgcggagctt
gttttggggaataggaatgggaaaagtgagagggatgatggtggtgcgcttgtggttttg
aaggagattcagtgtgttgatggggttgttagtgccatggtctggctgaatgattctatt
gttgttggtactgtgaatgggtacagtttgatttcatgtgttactgggcagagtagcgtg
atcttctcattgccggacgtgtcgtggccgccgaggttgaagctcttgcacaaggagtgg
agggtgctgttgctggtggacaatgtgggggttattgttgatccccatgggcaacccgtg
ggggggagtctggtcttccggcacgggttggattccatgggggagattgattcctatgtg
gtggttgtgagtgatgggaagattgggttgtatcataagaggcatggtggttgtgttcag
gtgttgcccttcggcggggaaggggttgggcgatgcgttgttgccagcgaggaagataag
ggtgggaggcttgttgctgttgcaactgctaccaaggtagtgtgctatcagaaattacct
tctgtagaacaaataaaagaccttctgaggaagaagaactataagggagccatatccttg
gtggaggagctagagtcagaaggtgaaatgtcaaaagatttgctctcgtttgttcatgct
caagtgggattcctcttgctttttgacttgcattttaaagaagcagtggaccacttcttg
ctttctgagacgatgcaaccttctgaagtattcccatttataatgcgagatccaaatcgc
tggtccttactggttcctaggaataggtattggggtttgcatcctccaccggcccctctt
gaagatgtaatagatgatggcttgatgacaatccaaagagcttctttcctgaggaaagca
ggtgtagaaacaatagtagataatgatctttttctcaatccagcaaatagagctgatttg
ttggagtcagcaatcaagaacattagcaggtatttggaggcctgtcgtgaaaaagaccta
acggaatcagtcagggagggagttgacacactactaatgtatttgtatagagctctaaat
tctgttgaggacatggagaagctggcttcttctataaactggtgtgttgtggaggaattg
gagcagatgttagaagagtctgggcacctaaggacacttgccttcctatgtgcaagtaaa
ggaatgagctcaaaagctgtgcatatttggcgcatcctagctagaaattattcatccggc
ctctggaaagacccttctttggagaataatacacagaatagtgggggaaaccttatttct
ggcagggtaattgctgcagctgaagcttcaaagattcttgaggaatcatctgaccaagaa
ttgattctacaacatctaggatggattgcagatatcaaccaagttcttgcagtcaatgtt
ttaacttcagacaaacgagagatcgagctttctcctgatgaagttgttacaactattgat
ccgcagaaggcagaaattttacagaggtatctccagtggttgattgaagaccaggactgt
aatgatacacagttgcatactttgtacgccctctcacttgccaaatcagcaattgaagcc
tttgaatctgaaaatatttctgagaatcttgatagtggaaatatagagacaagaagtttg
gctatgttgaagaactcaatctttcagattcctgtcagggaaagattacagatatttttg
caatcctcagacttgtatgatccagaagaagttcttgacttgattgaaggatcagaatta
tggttagaaaaggctattctgtatagaagactggggcaggagactttggtcctccaaatt
ttggctttgaaactggaagacagtgaagctgctgagcaatattgtgctgagataggaaga
gctgatgcatatatgcagttgcttgaaatgtatttggatccacaagatgataaggatccc
atgtttactgctgctgttcgccttctgcataatcatggagaatcattagatccattgcaa
gttttagagaaactgtctccagatatgccacttcaacttgcttctgacactttactaaga
atgttcagggccagagttcatcatcatcgtcaaggacagattgtgcataatttatctcgt
gccgtagacattgatgcaagattgtcaagattggaggagaggtcaaggaatgtacaaatt
aatgatgagagcctctgtgactcctgtgatgcacgtcttggtacgaagctatttgcaatg
tatcctgatgacactgttgtatgttacaagtgttaccgccgtcaaggtgagtcagtgtct
gtctcaggtcgcaattttaaggaagacatcctaattaaaccgggttggctcgtgagtcgt
tga
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