Glycine max (soybean): 100777660
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Entry
100777660 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100777660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100777660
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100777660
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_12
TPR_2
DUF4618
TPR_7
TPR_1
TPR_8
PrmA
Motif
Other DBs
NCBI-GeneID:
100777660
NCBI-ProteinID:
XP_003546115
UniProt:
I1MCH7
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Position
15:767137..775820
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AA seq
861 aa
AA seq
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MANEDLGSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTIRTEAPSQSI
AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSNVGTLPGQLAFVSST
SQVSSGMPSMEIVPLTGRPIVEKKASVYAEVVKKLNKARESGSPFKPAAAFKGAYENLGI
DASGGKSVTMRKIWHLVQMLMGEESAVQRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHP
AQAALGGGVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRSGYYDE
ARNVAQSSRASHQFAPLLTEWINKGGMVPEEIAAAASEECERMLRTGDRVGRTAYDKKKL
LLYAIISGSRRHIDRLLRDQPSLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLD
DLQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAAHLSIV
LADHGVLSEGAGSGQKLGVMDAYAEVSTIIRQYGSMYLRLGDLQMALEYYAQAAAAVGGG
QLSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGAGEEGELGRFVTDPKARQ
LFLIEAACHCQEAGMYDKSIEIQKRVGSFSTALDTINKCLSEAICALFRGRLDGESRTAG
LIHSGNEILETYTYYPDASLQEREHVLEQQTVLRQLESILSIHKLVRLGHYVDALREVAK
LPFIPLDPRGPDIAVDVLENLSPHVQACIPDLLKAALTCLDNVTDSDGSLRALRAKIASF
IANNLKRNWPRDLYESVAQRL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagacttgggtagttggactgatctgctacattcctctacgaagcttctc
gaacaagctgctccttctgctcagttccctccacttcagaggaacttagatcaattggaa
gcgttatccaagaagcttaaatccaagaccataaggactgaagcaccttctcaatctatt
gctgcaacaaggctccttgctcgtgaggggataaatgcagagcagcttgcaagggatctg
aagtcatttgaactgaagacaacttttgaggatgtttttcctgttgaagcaacaagcgtt
gaagagtatctgcagcaggttcatgaaatggcaatggtctctgctgtccaggaagctcag
aaggataatctcaggagtttcaatgattatatgatgaaagtattagaggaggattggcaa
aaagaaaaacgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaac
attgctgctaacagcaacgtgggtaccctcccgggtcagcttgcatttgtgtcttctact
tcacaagtctcttctggtatgcctagcatggagattgttcctctgactggcagacctatt
gtggagaaaaaggcatctgtctatgctgaggtagtgaaaaaactgaataaagcaagggag
tctgggtcaccatttaaacctgctgcagctttcaaaggtgcatatgaaaatttgggcatt
gatgctagtggtggaaagtcagtaacgatgcgaaagatatggcaccttgttcagatgctg
atgggtgaggaatcagccgtgcaacgtgtttcaaaaaggatgtcattgattattggtgca
agacgccaccttgaatggggacatgagaaatacatcatggataccatacaaagtcatcct
gcacaagctgctcttggtggtggtgttgggaatttgcaaagaatccgtgccttccttcgg
attcggttgagggattatggtgtactggattttgatgctggcgatgctcggcggcagcct
cctgttgataccacatggcagcagatatatttttgcctgaggtctggttattacgatgaa
gcaagaaatgttgcccaatcttcacgtgcttcacatcaatttgctcctttgctgacagag
tggattaataaaggagggatggtaccagaagagattgcagctgctgcatctgaggaatgt
gaaagaatgttgagaactggtgaccgggtaggtcgaactgcatatgacaagaaaaagtta
cttctatatgccatcatatcaggttctcgaaggcatatcgatcgcctgcttagagatcag
ccaagtctctttagtacaatagaggatttcttgtggttcaaattgtcagctgtgcgggat
tgccctagtggaccttcatccattgttctaagtgatggtctgattccatacagtttggat
gatttgcaaagttacctgaataaatttgagccctcatactatacaaaaaatggaaaagat
cctttggtatatccctatatcttgctgttaagcattcaattgcttccagctgtattatac
ttgtctaaggaagcaggagatgaaggatataacattgatgctgcccacctttcaattgtg
ctagctgatcatggggtcctttctgaaggtgctggttctgggcaaaagttgggagtgatg
gatgcttatgcggaagtgtccaccattatcaggcagtatggatctatgtatttgcgtctt
ggtgatctccaaatggccctagaatactacgcacaagctgctgctgcagtgggtgggggg
caattgtcgtggactggtagaggtaacgttgatcaacaaaggcagagaaatttgatgctg
aagcagcttctaactgaactattgttaagggatggaggcatatatcttctacttggtgca
agaggtgcgggtgaagaaggtgaattgggacgttttgtgactgatccgaaagcaaggcaa
ctatttttaattgaagctgcatgccactgtcaggaggctggaatgtatgacaagtctata
gaaattcagaagagagtgggttccttctcaacggcactggataccatcaataagtgcctg
tctgaagctatttgtgcccttttccgtggaagattagatggcgagagccggactgctggc
ctcatccattctggcaatgagattttggagacatacacttattacccagatgccagtctt
caagagagagaacatgttttggaacagcaaactgtgttacgacaacttgagtcaatattg
tctattcacaaattagtaaggcttggacattatgttgatgcattaagggaggttgctaaa
cttccatttattcctttagacccccgaggccctgacattgctgttgatgtgcttgaaaat
ttatctcctcatgtccaagcttgtattccagatcttttgaaggctgctctcacttgtctg
gacaatgtgacagactctgacggatctcttcgtgccttgagggctaagattgcgagtttc
attgcaaataatttaaagaggaattggcctcgtgatttatatgagagcgttgcgcagagg
ctgtga
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