Glycine max (soybean): 100778100
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Entry
100778100 CDS
T01710
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100778100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100778100
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100778100
Hops complex
100778100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_EML
zf-C3HC4_2
zf_RING_Vps8_fungal
zf-RING_5
TPR_ELP1
Motif
Other DBs
NCBI-GeneID:
100778100
NCBI-ProteinID:
XP_003521042
UniProt:
I1JMK4
LinkDB
All DBs
Position
3:complement(31060408..31066947)
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AA seq
965 aa
AA seq
DB search
MYQWRKFEFFEEKYGAKCAVPENDEDDGVVAAERKIECCSSGRGKLVTGFDDGVVCFFDR
GLKFNYSFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQQSALCLKVFDLDKMQPESSST
TSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDSGSIYCIKGDIARERITRS
KLQVENNHLDKTLSAVTGLGFKVDGQSLQLFAVTPCSVSLFSLHDQPPRRQTLDQIGSGV
NSVAMSDRSELVIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKHT
FNIYDLKNRLIAHSALVKEVSYMLYEWGNIILVMNDKSALCIGEKDMESKLDMLFKKNLY
TVAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDA
QRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVKKLNLFIKSDDSIGELKFDVETA
IRVCRAANYHEHAMYVARKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYG
KILIEHKPVETIQILIRLCTEDGNKRGRSNGVYMSMLPSPVDFLSIFIHHPQSLMDFLEK
YTNKVKDSPAQVEIHNTLLELYISNELNFPSMSQVNDGGNYLNGASAKTMILSAQSNGNI
GDHKSSEQGKDHLERREKGLRLLKSAWPQETEHPQYDVDLSIILCEMNAFKDGLLYLYEK
MKLYKEVIACYMQAHDHEGLIACCKRLGDSVKGGDSSLWADVLKYFGELGEDCSKEVKEV
LTYIERDDILPPMIVLQTLSRNPCLTLSVLKDYIARKLERESKMIEEDRQAIEKYQEDTL
AMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEY
RSVLEMKRNLEQNSKDQDRFFQQVKSSKDGFSVIAEYFGKGIISKISNGSTSGPRSGTAS
STSGF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggaggaagttcgagttcttcgaggagaagtacggcgcgaagtgcgcggtt
cccgagaacgacgaagacgacggcgtcgtcgcggcggagaggaagatcgagtgctgctcg
agtggtaggggcaaacttgtcaccggcttcgacgacggcgtcgtttgcttcttcgatcgg
ggcctcaagttcaactactctttccagcctcactcttcttccgttctttttcttcagcaa
ctcaagcaacgcaactttctggtaacaattggggaggatgaacagcttactccccagcaa
tcagctttgtgcctcaaggtttttgacctagacaagatgcaaccagagagttcgagcaca
acgagtcctgattgcgttgggatattgcggatattcactaatcagtttcctgaggcaaag
attacatcgtttttggttttagaagaagtgccacctatactactcatagctattggcttg
gacagtggttctatttactgtatcaaaggagacattgcacgggagcgtatcacccgttcc
aagcttcaggtggaaaacaaccatttggacaaaactctttcggctgtaactggacttggt
tttaaggtggatggtcaatctctacagttatttgcggtgactccatgttcagttagcttg
ttttcattgcatgatcaaccgccgagaaggcagacccttgatcagattggatctggtgtg
aacagtgttgcaatgagtgatcgctctgagttggtaattggtcgaccagaggcagtatat
ttttatgaagttgatgggcgtggtccttgttgggcttttgagggagagaagaaattgctt
ggatggttccgtggataccttttgtgtgttattgcagatcaaagaacaggaaagcatact
ttcaacatctatgacctgaagaatcgattaatagcccacagtgcattggttaaagaagtt
tcttatatgctttatgaatggggtaacatcatactcgtaatgaatgataaatcagcttta
tgtattggagaaaaggatatggaaagtaagttagacatgttattcaagaaaaacctatat
actgtagcaattaatcttgtccagactcagcaagcagatgcagcagctacagctgaagtg
ctaaggaaatatggggatcatctgtatagcaagcaagactatgatgaagcaatggctcag
tacatacatactattggtcaccttgaaccttcttatgttatacagaagtttttggatgct
caaaggatctacaacctcacaaattacttagagaagctacatgaaaagggtcttgcttct
aaagatcacaccacacttctattaaactgttacactaaattgaaagatgttaaaaagtta
aatctatttattaaaagcgatgacagcattggggaacttaaatttgatgtggaaacagca
atcagggtttgccgtgctgccaattaccatgagcatgcaatgtatgttgcaaggaaagca
gggaggcatgaatggtacttgaagatcctgcttgaagatcttggtagctatgaagaagcc
ttggaatatatttcaagccttgaatcaagtcaggcagggatgacaataaaggagtatggg
aagattctgatagagcacaagccagtggagacaattcagattctcataaggctttgcacg
gaagatggtaacaaaagagggcgctcaaatggagtgtatatgtctatgttgccatctcct
gttgattttcttagcatcttcattcatcatcctcagtcccttatggattttcttgaaaaa
tataccaataaggtcaaggactcacctgctcaagttgagattcataataccctcttagag
ttgtatatatccaatgaattaaactttccttcaatgtcgcaagttaatgatggtggaaat
taccttaatggagcatcagcaaaaaccatgattttaagtgctcagtctaatggaaacatt
ggtgatcacaaaagttcagagcagggaaaggaccatctcgaaaggcgtgaaaagggttta
cgcttgcttaagagtgcatggcctcaagagacagaacatccacaatatgatgttgattta
tctattatactatgtgaaatgaatgcattcaaagatgggcttttgtatttgtatgaaaag
atgaaactctataaagaagtgattgcttgctatatgcaggcacatgatcatgaggggtta
attgcatgctgcaagaggctgggggattctgttaaaggaggggactcatctctttgggca
gatgtacttaaatattttggtgagcttggagaagattgttctaaagaagtaaaagaagtt
ctgacttatattgagagggatgatattttgccccctatgattgtgcttcaaactctttcc
cgaaatccatgcctcacactttctgtgctcaaagattacattgctcgaaagcttgagcgg
gaatcaaagatgattgaggaggaccgacaagctattgagaaatatcaggaagatacactg
gcaatgagaaaagagattcaagatcttaggacaaatgctcgaatttttcagcttagcaag
tgcactgcgtgcaccttcacccttgatttgcctgccgtgcacttcatgtgcatgcactca
ttccacctgcgctgccttggcgataatgaaaaagaatgccctgagtgtgctcctgaatat
aggtccgtcttagaaatgaaaagaaatttagagcaaaattctaaggatcaggacaggttt
tttcagcaggtgaagagctctaaagatgggttttctgtcattgctgaatattttggaaaa
gggatcatcagcaaaataagtaatggatccacttctggtcccagatccggaactgcatca
tccaccagtggtttctaa
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