KEGG   Glycine max (soybean): 100778115
Entry
100778115         CDS       T01710                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03030  DNA replication
gmx03410  Base excision repair
gmx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100778115
   03410 Base excision repair
    100778115
   03420 Nucleotide excision repair
    100778115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gmx03032]
    100778115
   03400 DNA repair and recombination proteins [BR:gmx03400]
    100778115
Enzymes [BR:gmx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100778115
DNA replication proteins [BR:gmx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    100778115
DNA repair and recombination proteins [BR:gmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      100778115
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 100778115
NCBI-ProteinID: XP_014619734
LinkDB
Position
11:complement(38082984..38114014)
AA seq 2207 aa
MSGGRRRDGRDSRALKKRKLNRTPEEELEAKFGFDLFTEGEKRLGWLLTYASSSVDDEDG
YKVYSCVDLYFVAQDGSSFKTKFRFRPYFYVATKDKMEIDVEAYLKRRYEGQIADVEIIE
KEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPTVERNKVKSDAAEAFLSMSTERR
EQRPQDFLDCITDLREYDVPYHVRFAIDNDIRCGQWYDVGVPTNNGVTLEKKTDLLQRAE
VRICAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEF
EGCFKVTNVQNEIELLRLWFSHMQDVKPGIYVTYNGDFFDWPFLERRATHHGFKMSDELG
FKCDTNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCF
AKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFKLEPSAYQ
QLINNLDRDLQYAITVEGKMDLEFVSNYDEVKNAIMEKLVKLREAPIREECPLIYHLDVA
AMYPNIILTNRLQPPSIVTEEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKT
QIESEFVDDSEKNNRALSHYSEKSSKSFLDLPKAEQQSRLKERLKKYCQKAYKRVLDKPV
TELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMV
VLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLE
LDTDGIWCALPGSFPENFTFKTRDPKKKFTISYPCVMLNVDVAINNSNDQYQTLTDPIRK
TYTTRSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGEL
KLIKVFQAELFDKFLHGSTLEECYSAVASVANGWLDLLDNQGKDIADSELLDYISESSTM
SKSFADYGLQKSCAVATARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAVPVAIF
ETDAEVMKFYVRKWCKVSSDVDIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRV
VHPDWLHKKVREKEDKFRQRKLVDAFKSMNRNEHSKKHNDSNRVPLVIDDDIVNELEDFG
NKDRSSTCRPRPIIRHYEANNERHSGKLNDQDVEQQHNKPLQQKVDKNVDYEGWLQIKKQ
TWKDILERRKKRRLENSKKSDRVNGVLQQMNGKGNQGRSHVSSYLKRLEVDLTKRHWQII
QLVPSSLIGHFFAWVVVDGSMHKIPVSVPRVFYLNSRSDITEEFMGKRVNKTLPHGRHSY
NLYEVSINEIQYGEASKKLAALLADPDVEGVYETKVPLEFNAIVQLGCVCKVDKTANKRS
LQEPWNLSELHMKTTVECAYLEQSISFFYFYHSISEGRAIYVGYFPALKAITVVVVNPYQ
NKDLSPTFLERQFHDACQSLSIDSPPRNGINFKLDYVAHVKDAEAVMQRAINGHSHGREN
HMPMVAVIECPNVQLVKLGIQVLDNFPCLSVPYNARDSQYQILGWQQVAAKLXMQRCAAS
VQWLNQRIALSRYAHVPLGNFELDWLIFIADIFFSRALHDNQQVLWISDDGLPDLGGING
EQNCFVDEVQQPVLTYPGAYRNVTVELKIHHLAVNALLKYNLVNEMEGGTLLGFGHELDS
GAFSTNDQNGFDESTSCAQAFRVLKQLIQRCLADAVTSGNVYADSILQHLYRWLCSPKSK
LHDPALHQLLHKVMQKVFALLLAEFRKLGAMIVFANFTKIVIDTGKYDLSRAKAYCDSLL
RTIQSRDLFEWVELEPLQFWCSLLFMDQYNYGGIPTKSDEALNDESQVDIISSWNIAEYL
PKKIQDHFVFIVSQFMYIPWNYAKKQAQIRASLQNGDSCTPSINIGAAEAFESEVTEFTK
DQISSYFTHKLLGIVHDIGLHMKGMNRSENNQSTSGLPQLTGDVHRGDASLEFIKHVCAV
LALDHSVQHEVLVLRKNLLKYVDVKEFAPEAKFHGPCHSFVLSNVICSYCNDCRDLDLCR
DSALLTEEWRCAVPQCGQPYDREVMENALLQTVRQRERLYQLQDLVCTRCHQVKAAHLAE
QCVCAGSFRCKEDASEFREKMQIFLNIASHQKFQLLEECTSWILELR
NT seq 6624 nt   +upstreamnt  +downstreamnt
atgagcggtggccggagacgtgacgggagagacagcagagcattgaagaagcggaagctg
aaccgcactcccgaggaagagctcgaggcaaaatttggattcgatctcttcacagaaggc
gaaaagcgtctcggatggttactgacttatgcatcctcttctgttgacgatgaagacggt
tacaaagtatacagttgcgttgatctctactttgttgcgcaggatggctcttcattcaag
acaaaattcagatttcggccttatttctatgtagctacaaaggataaaatggagattgat
gttgaagcatacctgaaaagacgttatgaaggtcagattgcagatgttgaaattatagag
aaagaagacctggatcttaaaaaccatttatctgggttaagaaaatcttatttaaagctt
tcatttgatactgtgcaacaattgatggatgtgaagagagacctgatgcctactgttgaa
agaaataaggtcaagtctgatgctgcagaagcctttttgtctatgtcaacagaaagaaga
gaacaaagacctcaggattttctagattgcataaccgatcttcgtgaatatgatgttcct
tatcatgttcgctttgccattgacaatgatatacggtgtggccagtggtatgatgttgga
gtgcccactaataatggggttacacttgagaagaagacagatcttctgcagcgtgctgaa
gttcgtatttgtgcatttgacattgagaccacaaaacttccattaaaatttcctgatgct
gactatgatttaattatgatgatttcatacatggtagatggtcaagggtatttaatcata
aatagagagtgtgtcggggatgatatagaggatatagagtacactccaaaaccagagttt
gaagggtgttttaaggtgacaaatgttcaaaatgagattgagcttcttagattatggttt
tctcatatgcaagatgtgaaacctggtatctatgtgacatataacggcgatttctttgat
tggccattcctggaacgaagggcaacccatcatgggttcaaaatgagtgatgaattggga
ttcaaatgcgatacgaatcaaggggaatgtcgtgctagatatgcttgccatttagattgt
tttgcttgggttaaacgtgatagttatctccctcagggcagccaaggcctgaaggctgtt
acaaaagcaaagttgggttatgatccattggaggtgaaccctgaggacatggtttgcttt
gcaaaggaaaagccacagatgatggcctcctattctgtttctgacgcagtggcaacttat
tacttatatacaacttatgttcatccctttattttctctcttgcaaccattatacccatg
tcaccagatgaggttttgcgcaaaggtagtggaaccctctgtgaaatgttgcttatggtg
caggcatacaaggctaatgttatatgtcctaacaaacaccaatctgatccagagaagttt
tataacaatcatcttcttgagagtgagacgtacattggtggtcatgtggagtgtcttgaa
agtggtgtattcagatctgatattccatctagttttaaactcgagccatccgcctatcag
caacttatcaacaaccttgatcgagatctacagtatgctataacagtggagggtaagatg
gatttggaatttgtttctaattatgatgaagtaaagaatgcaatcatggaaaagcttgta
aaattacgagaagcaccaatacgtgaagaatgtcccctcatttatcatctggatgtagct
gctatgtatccaaacataattttaacaaaccgacttcagccaccgtcaattgttacggag
gaagtttgcactgcatgtgattttaatcgtcccggaaagacttgcctacgcaaacttgag
tgggtttggcgtggagaaacattcatggctaagaaaagtgactattatgctttaaagaca
cagattgaatcagagtttgttgatgattctgagaagaacaacagagccttatctcactat
tctgagaaatcatcaaaatcttttcttgaccttcccaaggcagagcaacaatcaagactg
aaagagcgtttaaagaaatattgccagaaggcatataaacgggtacttgacaaacctgtt
accgaacttcgtgaagcaggaatctgcatgcgtgaaaatccattttatgttgacactgtt
cgcagtttccgggatagaagatatgaatataaaggtctcaataaggtttggaagggaaaa
ctgtcagaggccaaggctagtggaaattctataaagatccaggaagcacaggatatggtt
gtgctttatgattcattgcaacttgctcacaagtgtatacttaattccttttatggatac
gtcatgcgcaagggtgcaagatggtactccatggaaatggctggagtagtgacatatact
ggtgcaaaaatcattcagaatgctcgcttgctagtagagaaaataggaaaaccacttgaa
ctagacactgatggtatctggtgtgcactacctggatcttttccagaaaatttcactttt
aaaacaagagacccaaagaagaagtttacaatctcatacccatgtgttatgcttaatgtt
gatgtggcaataaataactcaaatgatcaataccagacactcacagatccaatcaggaaa
acgtatacaactcgcagtgaatgctctatcgaatttgaggtggacggaccgtacaaggca
atgatccttcccgcttccaaggaagaaggaattttaattaagaagcgatatgccgttttt
aatgatgatggaacccttgcagagcttaaaggttttgagatcaaacgcagaggtgaactg
aagctaataaaagttttccaggctgaactttttgacaagtttctccatggttcaacttta
gaggaatgctattcagctgttgcttcggtggcaaatggctggcttgatcttcttgataac
cagggaaaggatattgcagacagtgagttgcttgattatatatcagaatcaagtaccatg
agcaaatctttcgctgattatggtctgcagaagtcttgtgctgttgccactgctagacgt
ctggctgactttcttggcgatacaatggtcaaagataaaggtcttcgatgtcagtacata
gtagcaagtgaacccaagggcacgccagtaagtgagcgtgctgttcctgtggcaatattt
gaaactgatgctgaggtaatgaagttctatgtccgaaaatggtgcaaggtctcatcagat
gttgacattcgatccataattgactggtcctattacaagcagcggcttagttctgcaatt
caaaaaattatcactattcctgctgcaatgcaaaaggttgcaaatcccgtccctagggtg
gttcatcctgattggttgcataagaaggtccgtgagaaggaggacaagtttcgccaacgg
aaattagttgatgcctttaaatcaatgaataggaatgagcactcaaaaaagcataatgac
tcaaatcgtgtccctcttgtgattgatgatgatattgttaatgagttggaggactttgga
aacaaggacaggagttctacatgcaggcctagaccaattatacggcattatgaagctaat
aatgaacgacattcagggaagctcaatgatcaagatgtagagcaacagcataataaacca
ttacaacaaaaagttgacaaaaatgtagattatgaaggatggcttcaaataaagaagcaa
acgtggaaagatattctggaaaggagaaagaagcgaagattggagaattcaaagaaatct
gaccgtgtaaatggtgttcttcaacaaatgaatggtaaggggaatcagggcagaagtcat
gtcagttcatatcttaaaaggcttgaggtagacttaacaaagcgtcactggcagataata
caactagttcccagttcactgataggccacttttttgcttgggttgttgttgatgggagt
atgcataagattcctgtttctgttcctagagtcttttacctcaattcaagatcagacatt
actgaagaatttatgggtaaacgtgttaacaagactcttcctcatggacggcatagttat
aacttgtatgaggtctcaattaatgaaattcaatatggggaagcaagcaaaaaacttgca
gctcttctagcagatcctgatgttgagggagtatatgaaactaaggtgccactggaattt
aatgcaattgtccagcttggttgtgtatgtaaggtggacaaaactgctaataaacgtagt
ctacaagaaccatggaatttgagtgaattgcacatgaagaccacagttgaatgcgcttat
cttgaacaatctatatccttcttttatttttaccatagcatctctgagggacgggctata
tatgttggatattttcctgcattaaaagcaataactgttgtggtagttaatccctatcaa
aacaaagatttatcaccgacttttcttgaaagacaatttcacgatgcttgccagtctttg
tctattgattcacctccgaggaatggcattaatttcaagttggactatgttgcacatgtc
aaggatgctgaagcagtgatgcaaagagcaataaatggtcacagtcatgggagggaaaat
cacatgcctatggttgctgtcattgaatgcccaaatgttcaattagtaaaattgggcatc
caagttctggataattttccatgcctgagtgttccttataatgcacgtgatagtcagtac
cagattcttggctggcaacaagttgctgctaaactgngaatgcaacgttgtgctgcatca
gtccaatggctaaatcaaagaattgctctctcaagatatgcccatgtaccgttggggaac
tttgaacttgactggcttatatttattgcggatatcttcttttcaagagcattgcatgat
aatcaacaggtactttggatatctgacgatggccttccagatttaggtggaattaatggt
gaacagaactgttttgtggatgaggtccaacaacctgttcttacatatcctggagcttat
agaaacgtaactgtggagctaaagatacaccacctggctgtaaatgctcttctcaagtac
aacctagttaatgaaatggaaggaggcactctattgggatttggtcatgaacttgattct
ggagcattttccacaaatgatcaaaatggttttgatgagtctacctcatgtgcacaagcc
tttcgagtccttaaacagttgatccagcggtgcctagcagatgcagttacatccggaaat
gtttatgctgattcaattttgcaacatctgtatagatggctttgcagccctaaatcaaaa
cttcatgatccagctctccaccagttactccacaaggtcatgcaaaaggtcttcgcattg
ttgttggcagagttccgcaagttaggtgctatgattgtatttgcaaactttacaaagatt
gttatagacaccgggaaatatgatctgtctagagccaaagcttactgtgatagtttgtta
agaactatacaatcaagagatctatttgaatgggttgagcttgaaccactgcagttctgg
tgctcgttgctattcatggatcagtataactatggtggaataccaacaaaatctgatgaa
gctctaaatgatgaatctcaagtggacattatatctagctggaatattgctgaatacttg
ccgaaaaaaatccaagaccattttgttttcatcgtttctcaattcatgtatattccctgg
aattatgcaaaaaaacaagcacaaatcagggcctcattgcagaatggtgactcctgtacc
ccatcaattaacattggagctgcagaggcttttgaatcagaagtaacagaatttaccaaa
gaccagattagctcttatttcacacacaaactgctaggaattgttcacgatattggtctt
catatgaagggtatgaacagatcagaaaacaaccagagtacatcaggccttcctcaactt
acgggtgatgtccatagaggggatgcttccttggaatttatcaagcatgtttgtgctgtc
ctcgcccttgaccacagtgtgcagcatgaagttttggtcttgagaaaaaatttgctcaaa
tatgttgatgttaaggagtttgctccagaagctaagtttcatggtccttgtcattccttc
gtcttatccaatgtcatatgcagctattgtaatgactgcagagacttggatttgtgccgt
gattcggctttattaactgaggagtggcgttgtgcagtgccacagtgtggccagccttat
gatcgtgaggtgatggaaaatgctcttcttcaaactgtaagacaaagagaacggctatac
cagctgcaagatctggtgtgtaccaggtgccatcaggtgaaagctgcacatttggctgag
caatgtgtatgtgcaggctcatttaggtgcaaggaagatgcaagtgaatttcgtgaaaaa
atgcaaattttcttgaacatagcttctcatcagaaattccaacttctcgaagaatgcacc
tcttggattttagaacttagatag

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