Glycine max (soybean): 100778597
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Entry
100778597 CDS
T01710
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
gmx03440
Homologous recombination
gmx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100778597
03420 Nucleotide excision repair
100778597
03430 Mismatch repair
100778597
03440 Homologous recombination
100778597
03460 Fanconi anemia pathway
100778597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmx03000
]
100778597
03032 DNA replication proteins [BR:
gmx03032
]
100778597
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100778597
Transcription factors [BR:
gmx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100778597
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100778597
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100778597
MMR (mismatch excision repair)
100778597
DSBR (double strand breaks repair)
HR (homologous recombination)
100778597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
DUF936
zf-CCHC_5
zf-CCHC_2
CDC24_OB3
eIF-4B
Motif
Other DBs
NCBI-GeneID:
100778597
NCBI-ProteinID:
XP_003533460
UniProt:
K7LF83
LinkDB
All DBs
Position
9:complement(44583587..44587293)
Genome browser
AA seq
894 aa
AA seq
DB search
MAVSLTQSAIMEMCSANCPEGLQPVLQVIELKLVQSQQNSNVERYRLVLSDGSHYQQGML
ATQKNDLVHAGKLQKGSVVRLTQFICNVVQSRKIIIIVDLDVVLDKCELIGEPVPAPKDA
PTESATGQSGVTSGNPQLLNSSSHTGGMPARPNVASPSPDHPKVNPSASGVYSSNAPPTY
PKVEHGVSRSAPFSGSSGGQNTGFRNPQFEASRPLQNSYARPPQQPMYRQPSPMYTNRAP
MGRNEAAPRIIPIAALNPYQSMWTIKARVTFKGELRHYTNARGDGKVFSFDLLDSDGGEI
RATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPCLDDN
DSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRKNGTEVQKRTLQLKDMSG
RSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKAVRVNDFNGKSVGTIATSQLYVEPDF
PEACTLKRWFENEGKSVPTLSISREISNLGKTDVRKTISQIKDEKLGTSEKPDWISVFAA
VSHIKVDNFCYPGCPLKIGDRQCNKKVTNNADGTWHCERCNQSIDTCDFRYLLSMQIQDH
TGITWVTAFQESGEEIMGIPAKDLYYMKYEEQDDDKFSEIFHKVLFTEYMFKLRIKEEFY
SDEQRIKSTIVKAEKVNFASKSRVNLELIFNELRAEKSKGITIPNSVTNNTRLGSVETGQ
VTPPAYYKSNANTSRDFGMPANQVGQQHGNQYSNISSAGAAPGSYTSCTNCGVSGHSSAL
CPNIRNVPGHSAGGGFANRASAGLGGGGGASVECYKCHQSGHYARDCPGFSAAPPSSYGS
NSGGGGSGECFKCHQTGHWARDCPGLSAAPSSYGSANAMQGRYGVAQKQQFGGY
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccctgacgcagagtgcgataatggagatgtgcagtgcgaattgccccgag
ggcttgcaaccggtgctgcaggtgatcgagttgaagctggtgcagtcgcagcaaaacagc
aacgtcgagaggtaccgtttggttctctccgacggttcacattaccagcaagggatgctc
gccacgcagaagaacgacttggttcatgctggaaagttacagaaaggttccgttgttaga
ctcactcagttcatctgcaacgttgtccagagccgcaagattattatcatcgttgaccta
gatgttgtactggacaaatgtgagctgattggagaacctgtccctgcaccaaaagatgca
cctacagaatctgcaactggtcaatcaggagtcacatctgggaatccacaacttttgaat
agcagttcacacactggtggcatgcctgctagaccaaatgtggcttcaccatctccagat
catccaaaagtaaatccttctgccagtggtgtttattcaagtaatgcccctcctacttat
cctaaagtagagcatggagttagtagatcagcaccattcagtgggtcttctggtggtcag
aacacaggtttccgcaatccccaatttgaggcgtcaaggcccttgcaaaactcatatgct
cgtccacctcagcagcctatgtaccgtcagccatctccaatgtacactaacagagcgcca
atgggaagaaatgaagctgcccccaggataattccaatagcagcattgaatccataccag
agtatgtggactattaaagccagggtaacatttaagggagaactcaggcactataccaat
gctcgaggtgatggcaaggtgttttcttttgatcttctggattctgatggcggagaaatt
cgggcaacttgcttcaatgctgtggctgatcagttctacaatgttattgaagctggtaag
gtatatctaatttccaggggaagcataaagccagctcagaagaattttaatcaccttcgc
aatgatcaagagctgacccttgatgtggcatcaattatacagccatgccttgatgataat
gactcaattccatcacagacatttaattatcgccccattagtgaaattgaaagtttggaa
aacaacagcattgtggatgtgattggtgtggtgacttctattagtcctacagcttcaatc
atgagaaaaaatggcactgaagttcagaagagaactctccagttgaaagacatgtcaggc
cgaagtgttgagttaactctatggggaaatttttgcattgtagaaggacaaaggttgcaa
actatttgtgatgctggggaatttccagttttggctacaaaagctgtcagagtaaatgat
ttcaatgggaagtctgtcgggactatagccactagtcagctatatgtggagcctgatttt
cctgaggcttgtacactgaaaagatggtttgaaaatgaagggaagagtgtcccaactctc
tctatttccagagaaatatctaatctgggtaagactgatgtgcggaagactatatctcaa
attaaagatgagaagttagggacttcagagaagcctgattggatatctgtctttgcagct
gtttcacacattaaggttgataacttctgttacccagggtgccctctcaagataggggat
agacaatgtaacaaaaaggtgactaataacgcagatgggacatggcattgtgaaagatgt
aatcagtctattgacacatgtgactttaggtacttactgtcaatgcagatacaggatcac
actggcataacatgggttactgctttccaggagagtggtgaggagataatgggtatacct
gcaaaagatttgtattatatgaagtatgaagagcaagatgatgataagttttctgaaatc
ttccacaaggttctcttcaccgagtacatgttcaagttaagaataaaagaggaattctac
agtgatgaacaacgtattaagtcaacgatagtaaaagcagaaaaggtaaactttgcttct
aaatctagagttaatttggagttgatttttaacgaactcagggctgagaaatcgaaaggt
atcaccattcccaactctgtaaccaataatactagactggggagcgttgaaactggacaa
gttacaccaccagcttattataagagcaatgctaataccagtagagattttgggatgccg
gcaaatcaagtgggtcaacagcatggaaaccaatatagcaatatttcttctgcaggtgct
gctcctggttcatatacatcatgcaccaactgtggagtctctggtcatagctctgcactt
tgcccaaatattagaaatgtacctggacattctgcaggagggggctttgccaacagggca
tctgcgggattaggtggtggtggtggtgcttctgtcgaatgctataaatgtcatcaaagt
ggtcattatgcaagagattgtcctggtttcagtgcagcacctccatcatcatatgggagc
aattcaggtggtggtggttctggcgaatgctttaaatgccatcaaactggccactgggca
agagactgtcctggtctcagtgcagcaccttcatcatatggaagcgctaatgcaatgcag
ggaagatatggggttgctcaaaagcaacaatttggaggatattga
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