Glycine max (soybean): 100778665
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Entry
100778665 CDS
T01710
Name
(RefSeq) RNA helicase aquarius isoform X1
KO
K12874
intron-binding protein aquarius
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100778665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100778665
Spliceosome [BR:
gmx03041
]
Complex B
Other components
Prp19-related factors
100778665
Complex C
100778665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
ResIII
UvrD-helicase
UvrD_C_2
AAA_22
SLFN-g3_helicase
AAA
AAA_16
AAA_25
DEAD
Motif
Other DBs
NCBI-GeneID:
100778665
NCBI-ProteinID:
XP_003555174
UniProt:
I1NCV6
LinkDB
All DBs
Position
20:61898..71678
Genome browser
AA seq
1524 aa
AA seq
DB search
MTKVYGTGLYDFRRHRVAEYPVAAAPAESKTLVPKTGGGGGGVPSSITLSEIQRDRLTKI
AEANWLKSGDAGRPKKDFDPELVRKIYETELLVKEGSKPVPLQRVMILEVSQYLENYLWP
YFDPLTATFEHVMSIIIMVNEKFRENVAAWTCFHERKDAFKGFLESVLRLKEGRELSIAE
KTNYLVFMINAFQSLEDEVVSRTILRLANLKSWYSLSYGRFQMELCLNPGLIKKWKRMIK
KEPVKGDGSHLDPSTTVEVMFVRNLIEEFLEILDSQVFPLKQLSGEDDELIDATGLGLVN
DACVLYCERFMEFLIDLLSQLPTRRYLRPLVADVAVVAKCHLSALYRHEKGKLFAQLVDL
LQFYEGFEINDHTGTQLTDHEVLESHYSRMQSFQLLAFKKMEKLRELALTNIGSIHKRAN
LSKKLSVLSPEELRDFVCCKLKLVSKEDPWSERVDFLIEVMVSYFEKQQSQKEAINALPL
YPNEQIMWDESVVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIREDIQ
EAVPHLLAYINNDGGTAFRGWSRMGVPIKEFKITEVKQPNIGEVKPSSVTAEVTYSVSSY
RAHIRSEWDALKEHDVLFLLSIRPSFEPLSTEEEDKASVPQKLGLQFVRGCEVIEIRDEE
GNLMNDFSGKIKRDEWKPPKGELRTVTVALDTAQYHMDVSNIAEKGAEDVYGTFNVLMRR
KPKENNFKAILESIRDLMNEYCIVPKWLENIFLGYGDPSAAQWTNMPDLLETVDFKDTFV
DADHLKESFLDYEVSFVNPDGSGNLNPRPPFKIKLPRTLKPNNGALTGHAISTSGATNEI
NVVDANYQKEALIIETYTPPDPGPYPQDQPKQNSVRFTPTQVEAIISGIQPGLTMVVGPP
GTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMQRDVPARYLLRLGQGEQE
LATDLDFSRQGRVNAMLVRRLELLSEVERLARSLQLPEDVGYTCETAGYFWLLHVYSRWE
QFLAACAENKEKSTFVRDRFPFKEFFCDTPHPVFTGESFEKDMRAAMGCFRHLKTMFQEL
EECRAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQIL
EIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGI
PYIELNAQGRARPTIAKLYNWRYRDLGDLPSVKEEVIFNRANAGFAYDYQLVDVPDYLGK
GETTPSPWFYQNEGEAEYVVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPY
DFIGPPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRS
LFEQCYELQPTFQLLLKRPDHLALNVNEITSYTERNVEDPGPGHHLHLVSGIEEMGSIID
RLYQEKLRHQFDQNGAYFSHLEPSANTDWVQSGQQTMDTDMPEQTEEATTVDNHVAVDMP
PENSMEDVTMVDNGDGVANGNPSP
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagtttacggcacggggttatacgatttccggcgccaccgcgtcgccgagtat
ccggtggcggcggcaccagcagagtcgaaaacgttagttccaaagaccggcggcggcggc
ggcggcgttccgagcagcatcactctgtcggagattcagcgcgaccggctgacgaagatt
gcggaggcgaactggttgaaaagtggcgatgcggggaggcctaagaaggacttcgaccct
gagcttgttcgcaagatctacgaaaccgaattgttggtgaaagagggttcgaaacccgtt
cccttgcaacgtgtcatgattctggaggttagccagtatctggagaattacctgtggcct
tatttcgaccctctcactgccaccttcgagcatgttatgtccatcatcatcatggtcaac
gagaagttccgagaaaatgttgccgcttggacttgcttccatgagaggaaagacgctttc
aaaggctttctcgagagtgttcttcgcttgaaggagggacgagaactaagtatagccgaa
aagacgaattacctagtttttatgataaatgcctttcagagtttggaagatgaggttgtt
agcaggacaatcttgagactggcaaatttgaaatcttggtacagtttgtcttatggtcga
tttcagatggagctttgtcttaatcctggcttgatcaagaaatggaaaaggatgataaag
aaggaacctgtgaaaggagatggatcacatttagatccctcaactacagttgaagtgatg
ttcgtgagaaacctcatagaagaatttctggagatactggattcacaggtatttcccctg
aaacaattatctggtgaggacgatgaacttattgatgctactggtttggggctagttaat
gatgcctgtgtcctgtactgtgagaggtttatggaatttctaattgacctcttgagtcaa
ttgccaacgaggaggtatttgaggcctcttgtggctgatgtagctgtagttgccaaatgc
catttaagtgcactctataggcatgaaaaggggaaactttttgcgcagttggttgattta
ctgcaattctatgaagggtttgagattaatgatcatactggaacacagttaacagatcat
gaggttcttgaatctcattacagccgaatgcagtcattccagctacttgcatttaaaaag
atggaaaagctgcgggaacttgctttgactaacattggttcgattcacaagcgtgctaat
ctgtccaagaaattgtctgttctttctccggaggagttaagagattttgtttgctgtaag
cttaaactggtctctaaggaagatccctggtcagagagggttgattttcttattgaagta
atggtgtcctattttgagaagcaacaatctcaaaaagaagctattaatgctcttcccctt
tatccaaatgagcagattatgtgggatgaaagtgttgtacccagcataaattactctgga
gaaggttgcttagcattacccaagctgaacttacagttcttaacacttcatgattatctt
cttcgaaattttaatctttttcgacttgagtcaacatatgagatacgtgaggacattcag
gaagctgttccacatcttcttgcatatattaataatgatggaggaactgcttttcgtggt
tggtcaagaatgggtgtgccaatcaaagaattcaaaatcactgaagttaaacaacctaac
attggagaagtcaaaccatcatctgtgactgcagaggttacttatagcgtttccagttat
agagcacatattagatcagaatgggatgcactcaaagagcatgatgtattgtttttacta
tctattcgcccatcatttgagcctcttagtacagaagaagaagacaaagctagtgtccca
caaaagcttggcctacaatttgtacgcggttgtgaagttattgagattcgtgatgaggaa
ggaaaccttatgaatgatttttctggaaagataaaacgtgatgagtggaagccaccaaag
ggggaactgagaacagtaactgtggctttggatacagctcaataccacatggatgtaagt
aacattgccgaaaaaggggcagaagatgtttatggtacatttaatgtgttgatgaggagg
aagccaaaagaaaacaattttaaagccatcctagaatcaataagggatttaatgaatgaa
tactgtattgttcccaagtggttggaaaacatttttcttggttatggggatccttcagct
gcacagtggactaatatgcctgatctattggagacagtagatttcaaagacacttttgtt
gatgctgatcacttaaaagaaagttttttggattatgaggtgtcttttgttaatcctgat
ggctcaggaaatttgaatccaaggcctccttttaagatcaagcttccccgaacactcaaa
ccaaacaatggtgctcttactgggcatgcaatatctacttctggtgcaacaaatgaaatc
aatgtggttgatgctaattatcagaaagaagcactaattattgagacatatactcctcca
gatcctggcccctatcctcaagatcagcctaaacaaaattcagttagatttacacccacc
caggttgaagcaatcatctctggcattcagcctggtctaactatggttgtggggccacct
ggtacaggaaagactgatacagctgtacaaattctaaatgttctttatcataattgtcct
tctcagagaaccttaataattactcattcaaatcaggctttgaatgacctgttcgagaag
ataatgcagagagatgttcctgcacgttatcttcttcgacttggtcaaggagaacaagag
ctagcaactgatcttgattttagccggcaaggtcgtgttaatgcaatgcttgttagacgg
ttagaattgctgagtgaagtggagaggctagcaagatctcttcaattgcccgaggatgtg
ggttacacttgtgaaactgcaggatacttttggttgcttcatgtttattcacgctgggag
caatttcttgctgcttgtgctgagaataaagaaaagtcaacatttgttcgagatcgtttt
cccttcaaagagttcttctgtgatacaccacatcctgtatttacaggtgagtcttttgag
aaagacatgcgggctgcaatggggtgctttcgtcatcttaagaccatgtttcaagaactt
gaagagtgtcgggcattcgaattacttaagtcaacagctgatagggctaactacttaatg
accaagcaggctaagattgtggcaatgacttgcacccatgcagctctaaagaggaaagat
ttcctccagttaggtttcaagtatgacaacttgctaatggaagaaagtgcccaaatttta
gaaattgagactttcattccaatgttactccagcggcaggaggatggtcatgcacggctt
aaacgctgcattctgattggtgaccatcaccagttgcctcctgttgtgaagaatatggct
tttcagaagtacagccacatggatcagagtctatttaccaggtttgtccgattgggcatt
ccttacattgaactaaatgctcagggaagagccaggccaactatagctaaactttacaat
tggagatacagagatttgggagaccttccttctgtaaaggaggaagtcatattcaatagg
gcaaatgctggatttgcttatgattatcagttagtggatgttccagattaccttggtaag
ggggagacaactccatctccttggttttaccaaaatgagggagaagcagaatatgttgtc
agtgtctatatatacatgcgtcttttagggtatcctgcaaataagatatcaattttgact
acatacaatggtcagaaacttctcatccgtgatgttataaataggagatgcgttccatat
gactttattggtcctcctagtaaggttactacagtggataagtttcaaggtcagcaaaat
gattttatattgctatctcttgtgcgtactcgatttgttggtcacctacgtgatgtaaga
agattggttgttgcaatgtcacgtgctcggcttggtttatatgtcttttgccgtcgttcc
ctttttgaacaatgctatgagctgcaacctacatttcagctgcttcttaaaagacctgac
caccttgcccttaatgtgaatgagattacatcatatactgaacgaaatgttgaagatcct
ggaccggggcatcatttacatcttgtcagtggcattgaggagatgggtagtatcatagac
agactgtatcaggaaaagttgagacatcagtttgatcaaaatggggcttattttagtcat
ttagaaccatcagcaaatacagattgggtgcaaagtgggcagcagactatggacactgat
atgcctgaacaaacagaggaagctacaactgttgataaccatgtcgctgtagatatgcca
cctgaaaacagcatggaagatgttaccatggttgataatggtgatggtgttgcaaatggg
aacccatcgccatag
DBGET
integrated database retrieval system
