Glycine max (soybean): 100778935
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Entry
100778935 CDS
T01710
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100778935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100778935
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100778935
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100778935
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100778935
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100778935
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100778935
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100778935
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100778935
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100778935
Exosomal proteins of other body fluids (saliva and urine)
100778935
Exosomal proteins of breast cancer cells
100778935
Exosomal proteins of colorectal cancer cells
100778935
Exosomal proteins of bladder cancer cells
100778935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
AAA_lid_4
Motif
Other DBs
NCBI-GeneID:
100778935
NCBI-ProteinID:
XP_003531614
UniProt:
I1KUU0
LinkDB
All DBs
Position
8:complement(15578572..15585251)
Genome browser
AA seq
574 aa
AA seq
DB search
MYRLARRVASSIASPSAKNLVYGGVLSSRNFVSKDINFGVGARAAILQGVTEVADAVKVT
MGPKGHNVIIERSRGNPRITKDGVTVARSIKFKDKSKNVGADLVKQVAKATNTAAGDGTT
CATVLTQAILTEGCKSIAAGINVMDLRNGINKAVDAVITELKSRTLMISTPEEITQVGTI
SANGERDIGELMARAMEKVGKEGVITVVDGNTLDNELEVVEGMKLTRGYISPYFITDQKT
RKCELENPFILIHDKKISDMNSLLKILELAVTKKRSLLVVAEDVESDALAMLILNKHHAG
LKVCAVKAPGFGDNRRASLDDLAILTGGEVITDERGLSLDKVQPEMLGTAKKVTITIDDT
IILHGGGDKKVIEERCEQLRTAMEESSATFDKEKAQERLSKLSGGVAVFKVGGASEAEVG
ERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLDNLQTQNEDEKRGVQIIQNALKAP
TSTIASNAGFDGALVHSKLLEQDDHNLGFDAAKGVYVDMVKAGIIDPLKVVRTALVDAAS
VSLLLTTTEAAVLDNPHDKNKPPSRVPDMDDLDL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagctcgtagagtagcttcttccattgcttctccctctgctaagaacctc
gtatatggtggagtattgtcaagcagaaattttgtgagcaaagatatcaactttggggtc
ggggctcgtgccgcaatcctccagggggtaactgaggttgctgatgctgtcaaagttacc
atgggacccaagggtcacaatgtgataattgagagaagtcgtgggaatcccaggatcacg
aaggacggtgtgactgtggccagaagtatcaaatttaaagacaaatccaaaaatgttggg
gcggatcttgtcaagcaggtggccaaggctaccaacactgctgctggagacggtacaact
tgtgcaactgttttgactcaggcaatactcacagaaggatgtaaatcgattgctgctggc
ataaatgttatggacttacgtaatggaataaataaggcagttgatgctgtaattactgag
ttgaagagcagaacattgatgataagtacaccagaagagataacccaggttggaactata
tctgcgaatggggagcgtgatattggagaattgatggctagggcaatggagaaagttggg
aaggaaggagtcattactgttgttgatgggaacactttggataatgaattggaagtggta
gaaggaatgaagttaaccagaggatacatatctccttattttattactgatcagaagacc
cggaaatgtgaattggagaacccctttattctcatccatgacaagaaaatttctgacatg
aattcattgctgaaaatactggagctggcagtaacgaaaaaaagatcactcttagttgtt
gctgaagatgttgagagtgatgcgttggctatgctcatactcaacaagcatcacgcgggg
cttaaggtttgtgctgtaaaagctcctggttttggggataatagaagagcaagtctagac
gatcttgcaattcttactggaggagaggtcatcactgatgagcgtggtttgtctcttgat
aaagtccaaccagaaatgcttggcactgcaaaaaaggttactatcaccattgatgacact
attattctacatggtggtggggataagaaggtcattgaagagagatgtgaacagctgagg
acagctatggaagagagttctgccacatttgataaagaaaaagcacaggaacgcctatca
aaactatctggtggtgtagctgttttcaaagttgggggggctagtgaggccgaagttggg
gaaaggaaagatagagtaacagatgctttaaatgccactagagctgctgtggaagaggga
attgttccaggtggtggagttgctctcctatatgctaccaaagtcttggataaccttcaa
actcaaaatgaagatgagaagagaggagtacaaattattcagaatgcactcaaggcacct
acctctacaatagcttcaaatgctggttttgatggtgctttggtccacagcaaattgttg
gaacaagatgatcataatttaggttttgatgctgctaaaggtgtctatgttgatatggta
aaggctggaataatagatcctcttaaagttgttagaacagctttggtagatgctgccagt
gtgtcattgctactgacaacaaccgaggcagctgtgttggataatccacatgacaaaaat
aaacctcctagtcgggtgccagatatggatgatttggatctctaa
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