Glycine max (soybean): 100778978
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Entry
100778978 CDS
T01710
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmx03016
]
100778978
Enzymes [BR:
gmx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
100778978
Transfer RNA biogenesis [BR:
gmx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100778978
Prokaryotic type
100778978
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7261
Motif
Other DBs
NCBI-GeneID:
100778978
NCBI-ProteinID:
XP_003519139
UniProt:
I1JGM9
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Position
2:40568391..40571167
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AA seq
548 aa
AA seq
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MENSDTTLTSSSLPPPPPVSAEEPEPKKLKMSTTTSDDEETGTKKRYKRRKVAIFFAYCG
VGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVS
GRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHR
DRETVMASLGSGNELVKCLECSERGRKVVGLVGNRKQNLELEAVDVEAGISSNRDSGVTE
DVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEK
VNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNAN
TTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTA
PEVGLYLDECFFTSYNQKWKDHEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWL
HSLNHRNYPDLRVINEEAIPNNKSADPKEAITDNKSADPEDATTKNKGADLKEAITDNKS
ADPEVVTE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggaaaactcagatacaacactgacaagttcatccctgcctccaccacctccagtatct
gcggaggagccagagcccaagaagttgaagatgtccaccacaacttctgatgatgaagaa
acaggcaccaagaaaagatacaagcgccgtaaggttgctattttctttgcttactgtggt
gttggctatcagggtatgcagaaaaaccctggtgcaaagaccattgaaggtgacctagaa
gaagccttgtatgtgtctggagctgttcctgaacaggatcgtggagttcctaaacgatat
gactgggctcgctcagctagaactgataaaggtgttagtgctgttggtcaggttgtctca
ggccggttctatattgatccacctggccttgttgaccgccttaattcaaacctcccctct
cagataaggatctttggttacaaacgtgtgacagcttcttttaatgccaaaaagttttgc
gaccggaggaggtatgtctatctcattcccgtgtttgctcttgatccaagctgtcatcgt
gatagagagactgtcatggctagtttgggatctggaaatgagcttgttaagtgtttggag
tgttctgagaggggccgaaaggtggtaggattagttggtaatcgtaagcagaatctggaa
ctagaagctgtggatgttgaggctggtatttcatcaaacagagactctggagttacagaa
gatgtggaggtttctttgagcaaaggtgatgataatcatttaaatgaggaatctgggaat
gataacaagggtggcatgaactgtaaaactggccttgagactgtgattcctgttcaggaa
gagggtactcctttgaatggtgaatctgtgaataattcagacattcttgaggaagaaaaa
gttaatggagaggataagccaaccaatggaagtaggttctgttatggtgagaaggagaga
gagagatttaataagattttgaagtgctttgtagggactcataatttccataacttcacc
accagaacaaaagctgaggaccctgctgctcgacgctacattatttcattcaatgcaaac
accactcttgtagttgagggcgtggaatttgtaaagtgtgaggttgtgggacagagcttc
atgcttcatcagatacggaagatgattgggctggcagtggcaatcatgagaaattgtgca
ccagagtcacttatcgatgaagctttgcagcaggatgttaacattaatgtgcctactgcc
cctgaggtgggattatatttggacgagtgcttcttcacttcatataaccagaagtggaaa
gatcatgaagagttgtcaatgaaagcatatgagaaagaagctgatgagttcaaaatgaag
tacatatattctcatattgcttccacggagcagaaggaaggaactgtcgctctttggttg
cattctttgaaccatagaaattatccagatctgcgtgttatcaacgaggaagccatcccc
aataacaagagtgctgatcccaaagaagccatcactgataacaagagtgctgatcctgaa
gatgccaccactaaaaacaagggtgccgatctcaaagaagccatcactgataacaagagt
gctgatcctgaagttgtgactgagtga
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