Glycine max (soybean): 100779042
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Entry
100779042 CDS
T01710
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100779042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100779042
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
100779042
Complex C
U5 SnRNP specific factors
100779042
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
Suf
TPR_19
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
PAP_PilO
ubiquitin
PMC2NT
Motif
Other DBs
NCBI-GeneID:
100779042
NCBI-ProteinID:
XP_003540356
UniProt:
K7LW22
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All DBs
Position
12:complement(37831821..37837953)
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AA seq
1041 aa
AA seq
DB search
MVFIVSPNHKTFSIDLNPNTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDD
SLLISDLGVGPYSTLTLHVPFLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR
SDIGPARAAPDLPDRSATTIGGTSGAGRGRGKPGEDEDDDEGEDKGYDENQKFDEFEGND
VGLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADL
KRRLYTLSPDDWQSLEKFESGGYSSRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKS
RAANGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKI
TSDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQVARQLIQKGCEECPKN
EDVWLEACRLANPDEAKAVIARGVKSIPNSVKLWMQASKLENDDANRSRVLRKGLEHIPD
SVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLSK
EPAIWITAAKLEEANGNTSMVGKIIERGIRALQREGVVIDREAWMKEAEAAERAGSVVTC
QAIIHNTIGVGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWIKAAQ
LEKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSE
EIWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGL
KQFPSFFKLWLMLGQLEEQLAENAKRLDQPEKWLDHMNAAKKVYESGLRNCPNCVPLWLS
LANLEEEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGYKKEADILMAKALQECP
NSGILWAASIEMVPRPQRKTKSADAIKKCDHDPHVIAAVAKLFWLDRKVDKARTWLSRAV
TLAPDIGDFWALLYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQAISKAVENSHQPTES
ILKKVVVALGKEENAAENNKH
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcatcgtgtcacccaatcacaaaaccttctccatagacctaaaccctaacacc
accactcttcatctcctcaaactcgctatacaacaaaccctaacccttccaatctcccac
cagcgcctcttcctctcccacagtcgccgattaaccgccgacaatgacggttccgacgat
tcccttcttatctccgatctcggcgtcggaccctactcaaccctaaccctccacgtcccc
ttcctcggcggcaccaaccctccggcggtgcccaaaccgcgcttcgacttcctcaactcc
aagccgcctccgaattacgtcgccggtctcggccgtggcgccaccggcttcaccacgcgg
tccgatatcggtccggcccgtgccgcgcccgaccttccggaccggtccgccaccaccatc
ggcggcacctccggcgccggacgtggccgcgggaagcccggggaggatgaggacgacgac
gagggcgaggacaagggatacgatgagaatcagaagtttgatgagttcgaagggaacgac
gtcggtttattcgcttcggcggaatacgatgaagatgacaaagaagcagatgcggtttgg
gaagcaattgataagaggatggattcgcggaggaaggataggagggaagcgaggttgaag
caggagattgagaaataccgcgcttcgaaccctaaaatcactgagcaattcgctgatttg
aagaggagattgtataccctttctcctgatgattggcagagtcttgagaagttcgagagt
ggggggtattcgtcgaggaacaagaagaagaggtttgagagttttgtgcctgtgcctgat
acacttttggagaaggcaaggcaagagcaagagcatgtgacagcattggatcctaagagt
agggctgctaatgggactgagactccttgggcacaaaccccggttactgatttgactgct
gttggtgagggtagaggaactgtgttgtctttgaagttggataggttgtcggattcggtt
tctgggatgaccaatgtcgatcctaaagggtacttgactgtgcttaatagtatgaagatt
actagtgatgctgagatttcggatttcaagaaggctaggttgctgctcaagagtgttacg
cagacgaatccgaagcacccaccgggttggattgcggctgcgaggctggaggagttggcg
gggaagctgcaggtggcgaggcagttgatacagaaagggtgtgaggagtgtcccaaaaat
gaggatgtgtggctggaggcttgtaggctggcgaatccggatgaggcgaaggcggtgatt
gcgcggggtgtcaagtccattcccaattcggtgaagttgtggatgcaggcttcaaagttg
gagaatgatgatgcgaataggagtagggttttgaggaaggggttggagcacattcctgat
tctgttaggctgtggaaggctgttgtggagcttgctaatgaggaggatgctaggcttttg
cttcacagggctgtggagtgttgtcctttgcatgttgaactgtggcttgcgcttgcgagg
ttggagacttatgacaatgctaagaaggttcttaatagggcgagggagaggctgtccaag
gagccagctatatggataactgctgccaagttggaggaagctaatgggaatacttccatg
gttggcaagatcattgaaaggggtataagggctttgcagagagaaggtgtggtgattgat
agggaagcttggatgaaggaagcagaggcagctgagcgtgctgggtcggttgtaacttgc
caagcaataattcataatactattggggttggagttgaagaagaagataggaagaggaca
tgggttgctgatgctgaggaatgcaagaaaagaggttctattgagactgcccgagctata
tatgctcatgccttgactgtcttcttaactaagaagagcatatggatcaaagcagcccag
ctggaaaagagtcatggtaccagggaatctcttgatgcattacttcgtaaagcagttacc
tacagaccacaggctgaagttctttggcttatgggtgccaaagagaagtggcttgctgga
gatgtgcctgcagctcgtgctatcctccaagaagcttatgctgccattcccaattctgag
gaaatatggcttgctgctttcaagctagaatttgaaaaccatgaacctgagagagctagg
atgctgttggctaaagccagagagagaggaggtacagaaagagtctggatgaaatcagca
attgtggagagagaactggggaacattgaagaggagaggagattgttagatgaaggtctg
aagcaattcccttcattctttaaattgtggttgatgcttggccagcttgaggaacagctt
gctgagaatgcaaagaggcttgatcagcctgaaaagtggcttgatcacatgaatgcagct
aagaaagtctacgaatctggattgagaaactgtcctaattgcgtaccactttggctctct
cttgctaatcttgaagaggagatgaatggactgagtaaagcacgtgcagttctcacaatg
gctcgcaagaagaatcctcaaaaccctgaactctggcttgctgctgttagagcggaattg
aagcatggatataagaaagaagctgatattttgatggcaaaagcattgcaggagtgtcct
aacagtggtattctgtgggcagcatcaattgagatggttcctcgtccccaacgtaaaacc
aagagcgcggatgccatcaagaaatgtgaccatgatccccatgttattgccgctgtggcc
aaattattttggcttgataggaaggtggacaaagccaggacttggttgagtagggctgtg
acactagcgcctgatattggggatttctgggcattgttatacaaatttgaactgcagcat
ggaacagaggagaaccagaaggatgtactgaagagatgtattgctgctgaaccaaaacat
ggagagaaatggcaagcaatctcaaaggctgttgagaattctcatcaaccaacagaatcc
atcttgaagaaagtagtggttgcacttgggaaagaagagaatgcggctgagaataataaa
cattga
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