Glycine max (soybean): 100779287
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Entry
100779287 CDS
T01710
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
gmx
Glycine max (soybean)
Pathway
gmx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100779287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100779287
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100779287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
100779287
NCBI-ProteinID:
XP_003516574
UniProt:
I1J8W6
LinkDB
All DBs
Position
1:complement(52397882..52407269)
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AA seq
1055 aa
AA seq
DB search
MEADAIAVDSTELKLTELLKEVNVDHSHQFSKLVDDTVSAIKTSIDKIPNDFKVTADLAS
RFVTDIGADKVEFKFKKPASVKIGGSYSIQSIAKPEVNVDLIIRLPKECFHEKDYLNYRY
YAKRCLYLCLMKNYLEKSPSIDRVEWSTLQNEARKPLLVVYPAAKLVEVPGFFVRIIPSA
KAIFSIAKLNLKRSNIHNLSDGTALLATPKYNSSILEDMFIEDVEFINNYFLGWKELREA
LILLKVWARQRSSIHVHDCLNGFLISVILAYLASKQHITNSMKSTEIIRITLNFIATSEL
WSRGLYFPKEGHSNITKEQRMQLKESFPVVISHPFGGFNLAFRMSRIGFTQLQNEATLTL
RCMEKCRDGGFEEVFMTKIDYAGKYDYCMRINLKGKKEVFASGFCLDDECWRSYEDKIHG
ILSKGLNDRAKFIQVTWRNTHCQWSVDDGLSVLDKVPLFIGISVSTLEKAFRMVDIGPNA
ESKEEALEFRKFWGEKAELRRFKDGRIAESTVWEIEQWAKHLILKRIVEHVLSRHLSLSK
ENIVVVVDQLDFSLLHGSGDPISYSGNLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFR
FTSVFPPEPHHLANEKHESLRLNKLVPSCIQPLEVMIQLEGSGNWPMDEIAIEKTKSSFL
VQIGVSLQKMWGMTCTATEDNVDVLVSGYAFRLKILHERGLSLLNKEIGNDQAKRIPSAD
KKLFIRSQHANMINGLQSRYAIFGPVVRLAKRWAASHLFSSCLVEEAVELLVAYLFLNPL
PYDVPCSRITGFLRFLRLLSHYDWTFSPLIVDINHDLSQSDGKEINDNFLLRRKGQGENG
QSVGSAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLAKLTFLEEIGPFRWEC
LFRTPLNNYDAVIFLHKDKLPYPQRLLFPSEVNHGTHVAEGQASKCFQPFLLPKDLKGRP
EELRNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYPSKKRKHEEVV
VEEEYNPCKVLKAVGEVGKGFVKSIYFLKPPKLMN
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgacgctattgctgtggactcaacggagttaaagttgacggagctattgaag
gaggtcaacgtagaccactcacatcagttctctaagctcgtcgacgacaccgtttccgcc
attaaaacctccattgacaaaatccccaacgatttcaaggtaactgctgatttagcttcg
cgctttgttacggacattggtgctgataaggtcgagttcaagtttaagaaaccagcgtct
gttaagattggtggaagttactccatacaaagtattgcgaaacctgaagttaatgtggat
cttattatcaggttgccaaaggaatgcttccatgagaaggactatttgaattacagatat
tatgctaagaggtgtctctatctctgtttgatgaaaaattatttggagaagtctccatct
attgatagggttgaatggtccactctacagaatgaagccagaaaacccttgctcgttgtg
tatccagctgctaagcttgttgaagttcctggtttttttgtaagaattattccgtcagct
aaggctatatttagcatagcgaagttaaacttgaagcgcagcaacattcataatttgagt
gatgggactgctcttctggctacaccgaagtacaattctagtattttggaagacatgttt
atagaagatgtggaatttatcaacaactattttcttggatggaaggaactaagagaggct
ttaatcctgcttaaggtttgggctcgacagagaagttcgatacatgttcacgactgcctg
aatgggtttttgatttccgtcattttggcatatcttgcttctaagcaacatattacaaat
tcaatgaaatcaactgaaataattcgtatcacgttgaacttcattgccacctcagagttg
tggagtcgaggtctctactttccaaaggaaggccatagcaatattacaaaagagcaaagg
atgcaacttaaagagtcatttccagttgtcatatctcatccgtttggaggattcaatttg
gcttttcgaatgtctaggattggttttactcagcttcaaaatgaggctactttgacactt
aggtgcatggaaaagtgtagagatggtggatttgaggaagtttttatgaccaagattgac
tatgctggtaaatatgactattgtatgagaataaatttgaagggaaagaaggaggtattt
gcatctggattttgtttggacgatgagtgctggagatcatatgaggataaaatacatggt
attttgtctaaagggttgaatgatagagccaaattcattcaagttacatggagaaataca
cattgccagtggagtgtcgatgatggcttgtcggtacttgataaagtgcccttgttcata
ggaatttcggtgagtactttggagaaagcatttaggatggttgatattggcccaaatgct
gaaagtaaagaagaggctcttgaatttcgaaagttttggggagaaaaagcagagcttaga
agatttaaagatggtagaattgcagaaagcacagtatgggaaattgagcaatgggcgaag
catcttattttaaaaagaatagttgagcatgtacttagtaggcatctttctctgtccaag
gaaaatattgtggttgtcgtggatcaacttgatttctctttgcttcatggttctggagat
cctatatcatactctggaaatttgcttggggcatttgatgttttatcaaagcgtttgcgt
cttattgaagacctccctttgaaggtgtctagtgtacagcctttagactctgctttcagg
tttacatcagtcttccctcctgaacctcatcatctagcaaatgaaaaacatgaatctctc
agactgaataagttagttccatcatgcattcaaccactggaagttatgattcagctggaa
ggttctgggaactggccaatggatgaaatcgcaattgaaaaaacaaaatctagtttcctt
gtccaaattggagtgagtcttcaaaagatgtgggggatgacatgtactgccactgaggat
aatgtggatgtgttggtgtctggatatgcatttcgtctaaaaattttgcatgagaggggt
cttagtttgctcaacaaggaaattgggaatgatcaagctaagcggattccttctgctgac
aagaaactttttatccgaagtcagcatgctaacatgatcaatgggttacaaagtcgttat
gcaatatttggaccagtagttagacttgcaaaacgatgggctgcttcacatctattttca
tcctgcttggtagaggaggctgttgagctattggttgcatatctttttcttaatcctttg
ccatatgatgttccctgctcacggatcactgggtttttgaggttcctgcggttactctcg
cactatgattggactttctctccgctgatcgttgacataaatcatgacttgagccaaagt
gatgggaaagaaataaatgacaactttttgctaagaagaaaaggtcagggagaaaatgga
caaagtgtaggatcagcaatgttcttagctacagtttatgataaagaatccgaggcttgg
actggattatcacctagtggaatggaacttaaaaggttagttgcatatgcccgaagcagt
gccaatttgttggcaaaactcacatttctggaagagattggtccatttagatgggagtgc
ctttttagaactcctttaaacaattatgatgcagtaatttttctccacaaggacaaactc
ccgtatccccaaaggcttctctttccatcagaagttaatcacggaacacatgttgctgaa
ggacaggccagcaagtgtttccaaccctttttgttgcctaaagatttgaagggcaggcca
gaggaacttagaaataagttgctggtagattttgatccatcaaagtgctttatcagagat
ttaaagcaagagttctcaaccacattccaagtatggcatgattatctgggaggtgatgtt
attggcctaacatggggggagtcatatccttccaagaagcggaagcacgaggaagtagta
gttgaggaagaatataacccttgcaaggtgttaaaagcggtgggggaagttgggaaagga
tttgtgaagagtatatattttctgaagcccccaaagctcatgaattaa
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