Glycine max (soybean): 100779302
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Entry
100779302 CDS
T01710
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
gmx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100779302
03083 Polycomb repressive complex
100779302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100779302
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
100779302
Histone modification proteins
HAT complexes
HATB complex
100779302
HDAC complexes
Sin3A-HDAC complex
100779302
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
100779302
PRC2.2
100779302
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
100779302
Heterochromatin formation proteins
Other heterochromatin formation proteins
100779302
Chromatin remodeling factors
NuRD complex
100779302
NuRF complex
100779302
NuRF complex (fruit fly)
100779302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_SPT8
TFIIA
Motif
Other DBs
NCBI-GeneID:
100779302
NCBI-ProteinID:
XP_003533752
UniProt:
I1L1H2
LinkDB
All DBs
Position
9:complement(5997706..6005231)
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AA seq
513 aa
AA seq
DB search
METPPPQQGVVKKKETRGRKPKPKDEHGKGLKEGRKTQQQQQQQQQHHHQQQQQQQDQPS
VDEKYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN
TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATH
TDSPDVLVWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKT
VVLWSIEDHITSAATDSKSGGSIIKQNSKSGEGNDKTADGPTVGPRGIYCGHEDTVEDVA
FCPSSAQEFCSVGDDSCLILWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLILTGSAD
NSVRMFDRRNLTTNGVGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKV
GKKIERSGKSISSPPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIW
RMSDLIYRPEDEVLAELEKFKSHVVACASKTEK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggagactcctcctccccaacaaggcgtcgtgaagaagaaggagacaaggggccgaaaa
cccaaaccaaaggacgaacacgggaagggtttgaaggaaggtaggaaaacacaacaacaa
caacaacaacaacaacaacatcatcatcagcagcagcaacagcaacaagatcaaccttcg
gtggacgagaaatacacgcagtggaagtcccttgttcctgtcctctacgactggctcgcc
aaccacaacctcgtctggccctctctctcttgcaggtggggcccccagcttgaacaagcc
acttacaagaatcgccagagactctacctttctgagcagactgatggtagtgtgccgaat
actctggtgattgcgaattgcgaggttgtgaagcctagggttgctgctgctgagcacatt
tcgcagtttaatgaagaggcgcggtccccatttgtgaagaagtacaagaccatcatacat
cctggtgaggtaaacagaattagggaattgccacaaaattccaagatagtggctacacat
acagacagccctgatgtccttgtttgggatgttgaaagtcaacctaatcgccatgctgtc
cttggagctacaaactctcgtcctgatttgatattgaccggacaccaagataatgcggaa
tttgctcttgctatgtgcccaactgaaccctatgttctttcaggaggaaaggacaaaaca
gtggtgttgtggagtattgaagaccatataacatctgctgctacagactccaaatctggt
gggtcaattatcaaacaaaactctaaatctggagaaggcaatgacaaaactgctgatggc
cctactgttggaccacgaggtatctattgtgggcatgaggatactgttgaagatgtggct
ttctgcccatctagtgcacaggagttctgtagtgttggagatgattcttgtctcatctta
tgggatgcacgtgttggctctagccctgtggttaaggttgagaaagctcataatgctgat
cttcactgtgtggactggaatccccatgatgataatctgattcttactgggtcagcagat
aattctgttcgcatgtttgatcgccgcaatctcaccactaatggagttgggtcacccatc
cataaatttgagggtcacaaagctgctgttctttgtgttcagtggtctccagacaaatca
tctgtatttggaagttcagctgaagatggtctcttaaacatttgggactatgagaaggtt
ggtaaaaagatagagcgatctggaaaatcaataagttctcctccagggttgttttttcaa
catgcaggtcatagggataaagttgttgacttccattggaatgcatatgatccatggacg
attgttagtgtgtctgatgactgtgaaagtactggaggagggggaacgttgcagatatgg
cgcatgagtgatttgatctacagaccagaagatgaggttttggccgagctggagaaattc
aaatctcatgttgtggcgtgtgcttcaaagactgaaaaatga
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integrated database retrieval system
