Glycine max (soybean): 100779503
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Entry
100779503 CDS
T01710
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100779503
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmx00535
]
100779503
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100779503
Meiosis-specific proteins
Cohesin complex and associated proteins
100779503
Proteoglycans [BR:
gmx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100779503
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
DUF7491
HAP1_N
APG6_N
LEKR1
DUF6507
Motif
Other DBs
NCBI-GeneID:
100779503
NCBI-ProteinID:
XP_003519466
UniProt:
I1JIN1
LinkDB
All DBs
Position
2:47394589..47413755
Genome browser
AA seq
1203 aa
AA seq
DB search
MYIKQVVIEGFKSYREQIATEPFSSKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRGED
RQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGFKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMH
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLT
EIEDARAKVSDTSARKYNDVLDAHEKSKDLENTLKDVTKELQNFNKEKEVIEKRRTVALK
KHTELELDVKDLQEKISGNTRAKEDAARQLEILEKEIQDSTAELGKIVPLHEDQVQKEKD
IVKRIMEREKKLSILYQKQGRATQFSSKASRDKWLQKEIDDLERVHSSNKGQEQKLLDEI
DRLKEELQDCDENINRRKSEITTLESLIAQSREGLNRYKEERDKLHGERKSLWGKENELT
AEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICREYNISGVHGPIIELLNCDEKFFT
AVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKGPRITYPQSSDVIPL
LKKLNFKHDYTPAFSQVFARTVICKNLDVASRVARSDGLDCITLDGDQVSKKGSMTGGFY
DHRRSRLRFMNIIKQNADTIHIREEELEKVRFNLQEIDQKINEIVAEQQKIDAKCAHDKS
VIEQLKQDIANANKQKLLISKALTKKEKSVGDVQNQIEQLNASIAMKKAEMGTELIDHLT
PEEKKLLSDLNPEIKDLKEKLVACKTDRIETEARRAELDTNLTTNLRRRKQELEAVISSA
DADSLVADAESKWQELSDAKILVDDAIGQLRSVTESINDRTRQIKKIKDELNKLKSLEDE
YERKLQEDAKELEQLQSKKNTYAAKEEEYAKKIRELGPLTSDAFEAYRRRNIKDLHKMLH
RCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVARHFREVFSELVLGGHGHLVMMKKKDGDHDDDEDEDGPREANPEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADIANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVSKEDALEFIEHDQTH
NAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggttgtgattgaaggttttaagagttatcgagagcaaattgctaca
gagcctttcagttctaaagttaattgtgttgttggtgctaatggatctgggaagacaaac
tttttccatgccatccgttttgtgttaagtgatctctttcaaaacctacgcggtgaagat
aggcaggcacttctccatgaaggagctggacaccaggttttatctgcgttcgtggagatt
gtgtttgataattcagacaatcgtatcccggttgacaaggaggaagtgcgcttgcgccgg
actataggtttcaaaaaggatgagtattttctagatggaaagcacataacaaaaactgaa
gtgatgaatttgctggagagtgctgggttctcccgatcaaatccttattatgttgtacaa
caaggaaagatagcatcactaaccttgatgaaagactctgaacgactggacttgctgaag
gaaataggtggtactagagtttatgaggagaggcgtcgcgaaagtttgaaaataatgcat
gaaactggtaataaaagaaagcaaataatccaagttgtacagtatttagatgaaaggttg
aaagaactagatgaggagaaggaggaacttagaaaatatcagcagcttgacaagcaaaga
aaatccttggaatatgctatttatagcaaagaagttcaagatgctcagcaaaaacttaca
gagatagaagatgctcgggccaaggtttctgacacatcagcaaggaagtataatgatgtt
cttgatgcacatgagaaatccaaagatttagagaatacattaaaagatgtaacgaaagaa
cttcaaaactttaacaaagagaaagaggttattgaaaagcgacgaacagtggcattaaag
aagcacacagagcttgagcttgatgtcaaagacttgcaagagaagatctctggaaatacc
cgagccaaagaagatgctgcaagacaactggagatacttgagaaagaaattcaagattca
actgctgaactgggcaaaattgttcctttacatgaagatcaagttcagaaagaaaaagac
attgtcaaacgaataatggagcgtgagaagaaactcagtatactttatcaaaaacaagga
cgtgcaacccagttttcaagtaaagcttctcgtgataagtggcttcaaaaggagattgat
gatcttgaacgagtgcattcttcaaacaaggggcaggagcaaaagcttttggatgaaatt
gatcggcttaaagaagaactacaggattgtgatgagaacataaacagacgtaaatcagaa
attactactttggaatctctcattgctcagtcacgtgaagggcttaatcgttacaaagaa
gagagagacaagttacatggggagagaaagtccctatggggcaaagagaatgaacttact
gctgaaattgataagctgagagctgaagttgagaaggctgaaaagagtcttgatcatgca
attcctggtgatgtgagaagagggttgaattcagttaggaagatctgcagggagtataac
atttctggagttcatggtccaattattgagttgctgaattgtgatgaaaagtttttcact
gctgttgaagttactgcaggaaacagcttatttcatgtggttgttgaaaatgatgacaag
tcaacccagataattagacatcttaattcacagaaaggtggtcgagttacatttattcca
cttaacagagtaaagggtccacgcatcacttatccacagagttcggatgtcatacctctt
ttaaagaaattgaactttaaacatgactatactcctgcattcagtcaggtctttgctaga
acagttatctgcaagaatttggatgtggcttcaagggttgctcgttctgatggtctggac
tgcataacactggatggtgatcaagtaagcaagaaaggtagtatgactggaggattttat
gatcacagacgatcaagattgaggtttatgaatatcattaagcagaatgcagacactatt
catattagagaggaggaattggagaaagttagatttaatctacaagagatagaccaaaag
attaatgaaattgttgctgagcagcagaagattgatgccaaatgtgctcatgacaaatct
gtgattgaacagcttaagcaggatattgctaatgctaataagcagaagctgttgatttct
aaagcacttacaaaaaaggagaagtctgttggggatgtccagaatcaaattgaacagctt
aatgctagtatcgctatgaagaaagctgagatgggcactgagctcattgatcatttaaca
ccagaggagaaaaagcttttgtcagatttgaaccctgaaatcaaagaccttaaagagaag
cttgttgcttgcaagactgatcgcattgagactgaagcacggagagcagagctggatacc
aatctaaccactaaccttaggagaaggaaacaagagctggaggctgtaatatcatctgca
gatgctgactctttggttgctgatgctgaatcaaagtggcaggaacttagtgatgctaaa
atattggttgatgatgcaatagggcagcttagaagtgttactgaaagtataaatgaccga
acacgacaaattaaaaagatcaaagatgaattgaataaattgaagtcattggaggatgag
tatgaaaggaaacttcaagaagatgcaaaagagttagagcaattgcagagtaaaaaaaac
acatatgctgctaaagaagaggaatatgccaagaaaataagggaactgggaccattgaca
tcagatgcttttgaggcgtatagacgaaggaatattaaagatttgcacaaaatgctgcac
aggtgcaatgagcaattgcagcagttcagtcatgtaaacaagaaagcccttgaccagtat
ataaattttacagaacaacgagaagaacttcagaaaagacaggctgaacttgatgcagga
gatgagaaaattaaggagctaataacagtgctagatcaacggaaggacgagtcaatagag
cgcactttcaaaggtgttgctaggcattttcgggaagtattttccgaacttgtgctgggg
ggacatggtcatctggttatgatgaaaaagaaggatggtgatcatgatgacgacgaagat
gaggatggtcctcgtgaagcaaatccagaggggagagtagaaaagtacattggagtgaaa
gtgaaggtctcatttactggacaaggggagacacagtccatgaagcagttgtctgggggt
caaaaaactgttgtcgcccttacacttatctttgccatacagcgatgtgatcctgctccc
ttttatctatttgatgagatcgatgcagcgctggatccacagtacagaactgctgttgga
aatatgattcgtcgcttggctgacatagcaaacactcaatttatcacaacaacattccgc
ccggagctagtgaaagttgctgataagatatacggagtaacacataaaaacagggtcagc
cgtgttaatgttgtgtctaaggaagatgcactggaatttattgagcatgaccagacgcac
aatgctgaataa
DBGET
integrated database retrieval system
