Glycine max (soybean): 100779982
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Entry
100779982 CDS
T01710
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100779982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100779982
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100779982
mRNA cycle factors
Common to processing body (P body) and stress granule
100779982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TcdB_toxin_midN
Motif
Other DBs
NCBI-GeneID:
100779982
NCBI-ProteinID:
XP_003529483
UniProt:
I1KMI5
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Position
7:complement(41574248..41581045)
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AA seq
974 aa
AA seq
DB search
MMIVEMDKMSAPSSRERAQRLYEKNLELESKRRRSAQVRVPSDPNAWQQMRENYEAIILE
DQAFSEQHNIEYALWQLHYKQIEEFRAYFSAALSSTNANSSQGVKGPARPDRISKIRLQF
KTFLSEATGFYHDLITKIRAKYGLPLGYFDDSENRIVMEKDGKKSAAMKKGLVACHRCLI
YLGDLARYKGMYGEGDSINREFTAASSYYLQAASLWPSSGNPHHQLALLASYSGDELVAI
YRYFRSLAVDSPFTTARENLIVAFEKNRQSFSQLSGDAKTLAVKESSGRSTGKGRGKGEA
KLATRGIGVDASPRTGASSIQETYKYFCTRFVRLNGILFTRTSLETFAEVLAVVSSGLRE
LLSSGQDEELNFGTDTPENALVIVRIVCILVFTVYNVNKESEGQTYAEIVQRAVLLQNAF
TAAFELMGYIIERCAQLCDPSSSYLLPGILVFVEWLAFYPDHAAGNDVDENQANLRSEFW
NRCVSFLNKLLSVGPMSIDDDEEETCFNNMSRYEEGETENRHALWEDSELRGFIPLLPAQ
TILDFSRKHSIGSDGDKERKARVKRILAAGKALVNVVKVDKQMIYFDSKAKKFVIGIEPQ
TTDDFGLTTDSGMPNAKQLGQENPADQSKMEIIQSNQHQHMEGDDDDEVIVFKPIVPETR
GDVIASSWAPHVGLEPVSKASGGDLKFHVNSTSNPLSNLSHQTSSVSGSGMVPQHLQPVQ
PHTSSWLEEEISLAYNLKGLGLFENGHVMKPGLQEAAGFSNHVSLPFPIQQSIGADTNAM
FYGFSKALESVVPSKVDVIASSGVVTDNLAVNTPTLPVGSRKAPVSRPTRHLGPPPGFSH
VPPKQGIESTVSDAISGNPIMDDYSWLDGYHLHASTKGLGSNGPLNYSQSNAQQVSNNGL
NPTVSFPFPGKQVPSVPLQVEKQNGWQDYQTYDLLKSHHDQQLQPQQLTTGNQQFSPLPE
QFQGQSMWTGRYFV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgatgatagtagaaatggataaaatgtctgctccttcatcaagggagcgtgcacaacgc
ctctatgaaaagaacctggagttggagagtaagcgtcggaggtcggctcaggtgcgtgtc
ccatcagatcctaatgcttggcaacagatgcgtgagaattatgaagcaataattcttgag
gatcaagctttctctgagcagcacaatattgaatatgctctttggcagttgcattataag
cagattgaggagtttagggcatacttcagtgctgctctttcttctacaaatgcaaactca
tctcagggagtgaaaggccctgcgcgacctgatcgcataagtaaaataaggctacaattt
aagactttcctttcagaagcaactggattttaccatgatcttattacgaaaatcagagct
aagtatggtcttcctcttggttactttgacgattcagagaaccggattgtgatggagaaa
gatggaaagaaatctgctgcgatgaagaaaggcttagtagcttgtcatcgttgtcttata
tacttgggtgatcttgctcgttataaaggaatgtatggtgaaggtgactcaataaaccgg
gagttcactgcagcttctagttattacttgcaagctgcatctctttggccttctagtggg
aacccccatcatcagcttgctttgttggcttcatattctggggatgagctggtggctatc
tatcgatattttcgtagtctggctgtagatagtccatttacaactgcaagagaaaacttg
atagttgcatttgagaagaatcgtcaaagtttctctcagctttctggtgatgctaaaact
cttgcagtcaaggaatcttctgggcgatcaactggcaaaggaagaggaaaaggggaagca
aaacttgcaacaaggggtattggcgttgatgccagtcctagaacaggagcatccagtata
caggaaacatataaatacttctgcacccgctttgtccgtctaaatggaatcttgtttaca
cgcacaagccttgagacttttgctgaagttcttgctgttgtaagctctgggctgcgtgag
cttctgtcttccggtcaagatgaagagctgaattttggtacagatactcctgagaatgca
cttgtcattgtcagaattgtctgcattctagtattcacagtttacaatgtgaacaaggaa
tctgaaggtcaaacttatgcagaaattgtacagcgtgctgttctgcttcagaatgcattt
acagcagcttttgaattgatgggctacataatagagagatgtgcacagctgtgtgatcct
tcttctagttatcttttaccaggcattttggtttttgttgagtggttggctttttatcca
gatcatgctgcaggcaacgatgtggatgaaaatcaggcaaatttgagatcagaattttgg
aatcgttgtgtatccttcttgaataagctgctttcagttgggcctatgtctattgatgat
gatgaagaggagacttgctttaataacatgagcaggtacgaggaaggggaaactgaaaac
cgacatgctttgtgggaggactctgagttaaggggatttattccacttcttcctgcacaa
accatcttggatttttcaaggaagcattccattggaagtgatggtgataaggaaagaaaa
gctcgggtcaaaaggattttagctgctgggaaggctttagtaaatgtggttaaggttgat
aaacaaatgatatattttgattcaaaggcgaagaaatttgtaattggtattgagcctcaa
accacagatgattttggtctaaccactgattcaggcatgcctaatgcaaaacagttaggg
caagaaaatcctgcagaccaatcaaagatggaaattattcagtcaaaccaacaccagcat
atggaaggagatgacgacgacgaggttattgttttcaagcctatagtgcctgagacacga
ggtgatgtgattgcctcatcatgggcaccccatgtgggtttggaacctgtttcgaaagca
tctggaggggatttaaaatttcatgttaattctacttctaatcctctaagtaacctaagt
catcaaacttcatctgtttctggtagtggtatggtgcctcaacacctgcaacccgttcag
ccgcatacatcaagttggttagaggaggaaatttctcttgcttacaatttaaaaggtctt
gggttatttgagaatggacatgtgatgaaacctggtctacaagaagctgctggcttctcc
aaccatgtttcacttccttttcctatccaacaatctataggtgctgatactaatgccatg
ttttatggtttctcgaaagctttggagtctgtagtaccgtccaaagttgatgttattgca
tcttctggagtagttactgataatttagctgtaaacacaccaactttgccagttggttca
agaaaagccccagtcagtcgacctactaggcaccttggacctccgcctggtttcagtcat
gttcctcccaaacaaggtattgaatccactgtttcagatgctattagtgggaatccaatt
atggatgattacagttggttggatggatatcatttgcatgcatcaacaaaaggattaggc
tccaatggccctcttaactactctcagtcaaatgctcagcaagtcagtaacaatggcttg
aatcctactgttagttttccctttcctggaaaacaagttccttctgtgcctcttcaagtg
gagaaacagaatggttggcaagactatcaaacttatgatcttttaaaatcacatcatgat
cagcagcttcagccacaacagctcacaactggaaatcagcagttttctcctctgcccgag
caatttcaaggacagtcaatgtggacaggtcgttactttgtgtga
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