Glycine max (soybean): 100780437
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Entry
100780437 CDS
T01710
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100780437
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100780437
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100780437
NCBI-ProteinID:
XP_006590673
UniProt:
K7LNC8
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Position
11:complement(4781512..4783037)
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AA seq
391 aa
AA seq
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MVSHVINHILWRFVLIIVIITLYTPNLSAAKQSKINGLKMNVIDRCWRLNPEWRRHRPQL
ATCSVGYTGKMTNNIGKDLIHYIVIDPSDDPINPKRGTLRYGASVIQGKVWITFQRDMHI
KLERPLLISSFTAIDGRGVNVHIANNACLMIFKATNIIIHGIRVHHCKPQAPGVVMGPEG
KVIPLGHVDGDAIRLVTASKIWIDHNTLYNCQDGLLDVTRGSTDVTISNNWFRDQDKVML
LGHDDGYVRDQNMKVTVVYNHFGPNCNQRMPRIRHGYAHVANNLYLGWVQYAIGGSMGPS
LKSEANLFIAPTIGSKEVTWRKSNHNNGDTWEFHSVKDAFENGASFTVTKGGRVPKPNYS
NEQYFKVVDVNFVRSLTRSSGILGCSKTSVC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggtctctcatgttatcaatcatatcctttggcgttttgttttgattattgtaattatc
accctttacactccaaaccttagtgccgcaaaacaatctaaaataaatggcttgaaaatg
aatgtgatcgatcgatgttggagactgaatcctgaatggaggaggcatcgacctcaatta
gcaacatgttcggtgggctacaccggcaagatgacaaacaacattggtaaagacctcatc
cattatattgttatagaccctagtgatgatcctataaaccctaaacgtggcaccttgagg
tatggagcttctgtaattcaaggtaaagtgtggatcacattccaaagagacatgcacatt
aaacttgagagaccccttcttattagtagtttcaccgcaattgatggtcgaggggttaat
gtccacattgctaataatgcatgcttaatgatctttaaggctaccaacataatcatccat
ggcattcgagttcatcattgcaaacctcaagccccaggggtcgtgatggggcctgaagga
aaagtgattcctttgggccacgtagatggggatgcaattagattggttactgcttcaaag
atttggattgaccataatacactatataattgtcaagatggtctacttgatgtaacacga
ggatccactgatgtgactatatccaataattggtttagagaccaagataaggttatgctt
cttggacatgatgatggatatgtgagagaccagaatatgaaggttactgttgtgtacaat
cactttgggcctaattgtaatcagcgcatgccaaggattcgccatgggtatgcacatgta
gcaaacaatctttacttaggatgggtgcaatatgccattggtggaagcatgggacctagc
ctcaaaagtgaagctaacctctttatagcacctacaatagggagtaaggaggtgacatgg
agaaagagtaatcataacaatggggatacatgggaatttcattcagtgaaagatgctttt
gaaaatggagcctcatttacagtaacaaaaggaggacgtgtgccaaaaccaaattatagc
aatgaacaatactttaaagttgttgatgtcaactttgttaggtcgttgacacgctcatcg
ggcatattaggatgcagtaaaacctctgtatgttga
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