Glycine max (soybean): 100780440
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Entry
100780440 CDS
T01710
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100780440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100780440
03036 Chromosome and associated proteins [BR:
gmx03036
]
100780440
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100780440
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100780440
PBAF complex
100780440
GBAF(ncBAF) complex
100780440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DNA_pol_B_N
Motif
Other DBs
NCBI-GeneID:
100780440
NCBI-ProteinID:
XP_006578964
UniProt:
K7KM59
LinkDB
All DBs
Position
4:complement(50255049..50262269)
Genome browser
AA seq
785 aa
AA seq
DB search
MPASPSENRTRWRKRKRDSQISRRHQKHEEDDDDDDENPNAEEDLAERDYDSEDQTHHNH
PNSQPHVETEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERALESGENKAPSALAA
PVLENVSHGQLQALSSVPSDSFAFDGDSSFVITPPPILEGRGVVKRYGTKALVVPMHSDW
FSPATVHRLERQVVPHFFSGKSPDHTPEKYMECRNCIVALHMEDPGKRITVSDCKGLLAG
VNVEDLTRIVRFLDHWGIINYCVRMPSHESPNAVSCLREETSGEVRVPSEALKSIDSLIK
FDKPNCKLKADEIYSSLSAHSADVLDLEDRIREHLSENHCNYCSCPLPVVYYQSQKEVDI
LLCTDCFHDGRFVIGHSSIDFVRVDSTRDYGELDGDSWTDQETLLLLEAMEIYNENWNEI
AEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSLSSNAINRDHSGRLHCYSNGDTAGT
VHQTRDSDNRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSEDNSGSTSQMEA
PGHDNRTNSENIHCRDGGPHGETAVSNNHNEDKAKVRGSWGLNEGRITPLSAEKVKDAAK
AGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQLERT
KQRCAADRSRIMSARLGTVGATPTMNASGVGPSMASNGNNRQQMISASSSQPSVSGYGNN
QPVHPHMSFAPRPSMFGLGQRLPLSMIQQSQPASSTAMFNAPSNVQPTTNHPLLRSVSGT
NSGLG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctctccttcagagaaccgaaccagatggaggaagcgcaagagagattcgcaa
atcagccggcgccaccagaagcacgaggaggacgacgacgacgacgacgaaaaccccaat
gcggaggaagacctcgccgaacgcgactacgattcggaggaccaaacgcaccacaaccac
cctaattcgcaacctcacgtggagacggaggtcctctccgaccacggcgttcagatttcg
cagttcccggcggtgataaagcgctccgtgaaccgccctcactcctccgtcaccgcaatt
gttgctctggagcgtgccctcgagtccggagagaataaggctccaagcgctctcgctgct
ccggttctcgaaaacgtgtctcacggccagcttcaagcgctgtcgtctgttccctctgat
agctttgctttcgacggtgattcctcttttgtcatcactccccctcccattttggaaggt
cgtggcgttgttaagcgctatggaactaaggctcttgtagttccaatgcattcagattgg
ttttcgcctgccacggtgcacaggttggagaggcaagtggtgccgcatttcttttcaggg
aaatctccggatcatactccggagaagtacatggagtgtaggaactgcattgttgccttg
cacatggaggacccagggaagaggattacggtttctgattgcaagggtttgttggctggg
gttaatgttgaagatttgactcggattgttaggttccttgatcattggggaattattaat
tactgtgttcggatgccgagtcatgagtctcccaatgctgtgtcttgcctaagggaggag
acgagtggagaggtccgtgtaccatcggaggctttgaaatctatagacagtttgatcaaa
tttgacaagcccaactgtaaactgaaagcagacgaaatttattcgtcgttgtctgcacat
agtgccgatgtcttagatctggaggacagaataagagagcatctatcagagaatcactgc
aattattgttcttgtcctcttcctgttgtatactatcagtctcaaaaagaggttgatatt
ttactctgcactgattgctttcatgatgggagatttgtcattggtcattcaagtatagat
tttgtaagggtggattcgactagggattatggtgaactagatggggatagttggactgat
caagaaactttgctgcttcttgaagcaatggagatttacaatgagaattggaatgaaatt
gctgagcatgttggtaccaagtcaaaagcacaatgcattcttcattttctccgtctaccc
atggaagatggaaaattggaaaatattaacgttccaagcatgtctttgtcatccaatgca
ataaatagagatcatagtggaagactgcattgttactcaaatggagatactgcaggaact
gtccatcaaaccagagattctgacaatcggcttccttttgcaaattctggaaatcctgtt
atggctttggttgcctttttagcttctgcggttggaccaagagtagctgcttcttgtgct
catgcagcattagcagtattgtcagaggataattctggcagcacgtcacaaatggaagca
ccgggacatgataataggacaaattcagaaaacatacattgtcgagatggtggccctcat
ggagaaacagcagtttcaaataatcataatgaggataaggcaaaggtgcgtggttcatgg
ggtctgaatgagggtaggataaccccactctctgctgagaaagttaaagatgcggctaaa
gcaggcctttctgctgcagcaatgaaagcaaaattatttgccgatcatgaagaacgtgaa
attcagaggttatgtgctaatatagttaatcatcagctgaaaagattggaattgaagctg
aaacagtttgcagaaattgaaacattgttgatgaaagaatgcgaacaactggagagaaca
aagcaaaggtgtgctgctgatcggtcccgcataatgtcagcacgtcttggaactgtagga
gccacacccacaatgaatgcatcgggtgttggtccctcaatggctagtaatggcaacaat
aggcaacagatgatctctgcttcttcttcacagcccagcgtctcagggtatggcaacaac
caaccagttcatccacatatgtcctttgccccacgaccttcaatgtttgggttggggcaa
agattgcccctatctatgatacaacaatcacaaccagcttcttcaactgccatgttcaat
gcccctagtaatgtgcagcccactaccaatcatccattgttgaggtctgtatcgggaact
aactctggtttaggttaa
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