Glycine max (soybean): 100780869
Help
Entry
100780869 CDS
T01710
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100780869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100780869
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100780869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
Clathrin
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
TPR_VPS8_2
Beta-prop_EML_2
Beta-prop_WDR5
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_THOC3
zf-RING_Vps41
WD40_Prp19
Beta-prop_HPS5
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
100780869
NCBI-ProteinID:
XP_006583204
UniProt:
I1KHP6
LinkDB
All DBs
Position
7:complement(4204017..4217066)
Genome browser
AA seq
1913 aa
AA seq
DB search
MELDLRSFLHSPTSTSSSDADADDGAPPRTIDDILNDCDTSSSSPSPPSSPSHSLSNNSR
PQNPTLQQKPLQPAPDSFSRVKPAEFSDRARVSRPFSSLLHGVRSNAKPGAALAAAAAAS
RSVPTPHAAAIISRRKSAAANIVESSSIAATGDVSSKGELGEPSEKFDPVPPKIETPSSE
SASAIGERFEIDAEIVTDLKAGSDDIQVHTDNNNNNADDDDDNDNDSSIVSEEKRDLDEV
DRDHEKDMNSAPFDDDDDRGFDGKGDDERITATGVAVETEEEVVVSNDISSMEDVKNEVS
VGGDDEGSSLGDVAELVEERLEELENRRAAKRAEKKRESSMKPLELAEELEKKRASTGLH
LEEGAAAQPMRLEGVRRGSTTLGYFDVDAGNAFTRAISSQTFRREQGSTRALAVHANYIA
VGMSKGLIVVFPSKYSIHHADNSDGKMMMLAIQGDRLHAPVTSMSFNQQGDLLLAGYGDG
HLTLWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLFHIISVVP
LFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSASPYTQGNTSAPASSISSMMGGVVG
GDAGWKLFNEAPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAWK
YMTQICSSTENMSAEAVERVSLLAIAWERKVLVAKLVKSELKVYGRWSLDGAALGLAWLD
DQMLVVLTSSGQLYLFSKDGTVIHQTSFSVDGIGGDDLVSYHTHFINIFGNPEKAYHNSV
AVRGASIYILGPTHLLVSRLLPWKERISVLRKAGDWMGALNMGMTLYDGHAHGVVDLPRT
LDAVHEAIMPFLMELLTSYVDEVFSYISVAFCNQIGKLDQSNDSNSRSNSVHSEIKEQYA
RVGGVAVEFCCHIKRTDILFDEIFNKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQEL
VEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFRAPLEE
LFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGSIPPSRLPSLRRELVEFLLKDT
CTPKSQTVSDFVYRRPHLNLYLLLKLDTEATLDVLRCAFMEDGISNASSSSPDSANKPIT
EAKKENDNVNKTQNALVQNTVDALIQIIDMNIVPTDKTSSSGDDGLIKDCPSKDIGYLFE
FIAYYVALQRAKISKGVLCQILEYLTSDSQFSTNVSVQGSSPKNREKQVLALLEILPESD
WDASFVLDLCERAKYHQVCGLIHSIRHEYVAALDSYMKDADEPVHAFSFINRAFSQLTDN
DHAAFRSAVIFRIPELVELSREGAFHMVISHFSNESSRIITDLHCHPRSLFLYLKTLIEL
HLFGTLDLSNLRKDGTMNPLNGRQVKDHPQGVRDYLENISNFPKYMRENPIRVPDDLIEL
YLELLCKYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGSALSLTLS
DLYDKFVELDTAVEAVVLNHRRVGSSHMEVFNSVLKTKEVSDIHNLLRACIGLCQRNTPR
LNPEESEAHWFKLLDSFCDPLMDSNVEERAYESKSYFGMLAGSADSQQDKDTHKSSWKIS
KSWTGHILKKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILGMLGTYG
FERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCVCNCPLTKNSVSSGIRIFNC
GHAIHLQCEVSEIEGSSKTSSSGCPVCPVCMPNQKSQQSRNKSIIAANGLVNKFSSRPQY
PHGSSIHPHDSDLSDNMYGQQQISRFEILSSLQKNRRFMQIENLPPLKLAPPAVYHEKVS
KVANFLTGESSNSSSAIEKQSRSKQNRELRVKGSSIRFPLKSSIFGKEKTNKR
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggagctcgacctccgttcattccttcactctccgacctccacctcctcctccgacgcc
gacgccgacgacggcgctcctccccgcaccatcgatgatattctcaacgactgtgacact
tcctcttcctcaccctcccctccttcttctccctctcactcactctccaacaattcccgc
cctcaaaaccccacactccaacaaaaaccactccaacccgcacccgattcgttttctcgg
gtcaaacccgctgaattctccgaccgcgcacgcgtttcgcgcccgttctcctctctcctg
cacggcgtcaggtccaatgccaagcccggcgcggcgctcgccgcggcggcggcggcgtct
cgatccgttcctacgccgcacgcggcggcgatcatctcccgtaggaaatccgcggctgcg
aatattgtcgaatcgagttcgatcgctgccaccggcgatgtttcttccaaaggcgagttg
ggcgagcctagcgagaaattcgatccagtgccgccgaaaatcgagactccgtctagtgaa
agtgcttctgctattggtgaacgttttgagattgatgcggaaattgtcactgatttgaag
gctggcagtgatgacattcaggtgcacactgataataataataataatgctgatgatgat
gatgataatgataatgattcttctatcgtgagtgaggaaaagagggatttagatgaggtt
gaccgtgatcatgagaaggatatgaattctgcaccgtttgatgacgatgatgatcgtggg
tttgatggaaaaggcgatgatgagagaatcactgctacgggtgtagctgtggaaacagaa
gaagaagtagtagtgagtaatgatattagttctatggaagatgttaagaatgaggtgagt
gttggtggtgatgatgagggtagttccttaggtgatgttgctgagctagtggaagagagg
cttgaggaattggaaaacagaagggctgctaagagagctgagaagaaacgggagtcttcg
atgaagccacttgaattggccgaggaactggagaagaagcgtgcttcaactggtttgcat
ttggaagagggtgctgctgcccagccaatgaggcttgagggcgttcggagagggtccacg
acattgggatactttgatgttgatgctggtaatgcgttcacaagggcaatttcgtcccaa
acattcaggcgtgagcaaggttccacccgagccttggcagttcatgctaattacattgca
gtaggaatgtcaaaagggctcattgttgtgtttcccagtaaatattccattcaccatgct
gacaactctgatggaaagatgatgatgcttgctatacaaggtgatcggttgcatgctcca
gtgacatccatgtctttcaatcaacaaggagaccttcttttagctggttatggtgatggc
catcttaccctgtgggatgtacagaaaggggtagtggcaaaagttattagtggtgaacat
acagcaccagtagtacatacattgtttctaggacaggatcctcagaatactcgtcaattt
aaagcagttactggtgattgtaagggtctggttctcttccacatcatctcagtggttcct
ttgtttagtagattctccatcaaaactcagtgtcttcttgatgggcaaagtacgggcttg
gtgctttcagcttcaccactcctttttgatgacttcagtggaagtgcttcgccttatacc
cagggaaacacctcagccccagccagcagtataagcagcatgatgggaggtgttgttggc
ggagatgcaggttggaaactcttcaatgaagccccttctttggttgaagaaggtgtggtt
gtatttgtcacccatcaaactgctttggtggtacggctgagccctacgttgcaagtttat
gctcagctctctaggccagatggagttcgggagggttccatgccatatactgcatggaaa
tacatgacacaaatatgtagttctactgaaaatatgtctgcagaagctgttgaaagagtt
tcattgcttgcaattgcttgggaacggaaggttttggttgcaaagttggtcaaatcagaa
ttaaaagtatatggaagatggtctcttgatggtgcggctttaggtctagcatggttggat
gatcagatgctggtagttctcacttcaagtggacaactgtatttattttccaaggatgga
actgtgattcaccaaacaagtttttctgtagatggtattggaggagatgatctagtctct
tatcatactcacttcatcaatatatttggaaatcctgagaaagcttatcataactctgtt
gctgtaagaggagcttctatttatatactgggcccaacacatcttcttgtttctcgtctt
ctcccttggaaagagcgtatttctgttttgcggaaagcaggtgactggatgggtgccttg
aacatgggaatgactctttatgatggccatgctcatggagttgttgaccttcctagaacc
ttggatgctgtacatgaagccataatgcccttcttgatggagttgcttacatcatatgtt
gatgaagtgttctcctatatttcagtggcattctgcaatcaaattggaaaactggaccaa
tccaatgattcaaatagtagaagcaattcagtgcattctgagataaaggagcaatatgcc
cgtgttggtggagttgccgttgaattttgctgtcatatcaaacggacagacattcttttt
gatgaaattttcaacaagttcgtggatgttcaacagagagaaacatttttggagcttctg
gagccctatattttgaaggacatgcttggatctctacctcccgagattatgcaagaactg
gtagagtattatagcaccaaagggtggttacagcgggttgagcaatgtgtacttcacatg
gatatatcatccttggattttaatcaggttgtcagattatgccgggagcatggactatat
agtgccctggtgtatgtcttcaataaaggattagatgattttagggcacctctggaggag
ttgtttgctgtcttacaaaatagccaaaaggaaagtgctactgcgcttgggtatcgaatg
ctggtttatctcaagtactgctttacaggtcttccctttccaccaggccgtggaagtatt
cctccctcacgtttaccatctcttagaagagaacttgtagagtttttgttaaaggacacc
tgtactccgaaatcacagacagtttcagactttgtgtacagacgaccacacctgaatctt
tatcttctcttaaagttagacactgaagctacattagatgtcctcagatgtgctttcatg
gaagatggaatttcaaatgccagctcatcttcaccagattcagccaataaacctataacg
gaagcaaaaaaggaaaatgataatgttaacaaaactcaaaatgctttggttcagaacaca
gttgatgctctcattcaaataattgatatgaatattgttcccacagataaaacctctagt
agtggtgatgatgggttgataaaagattgtccttccaaggacataggttatttgtttgag
ttcattgcatattatgttgctctccaaagggctaagatttcaaagggtgtgctttgtcaa
atattggaatatttgacatcagatagtcagttttcaactaatgtttctgttcaaggatca
tctccaaaaaatagagagaagcaagtgcttgcacttttggaaatacttcctgaatcagac
tgggatgcatcatttgtgctagatctatgcgagagagcaaaatatcatcaggtttgcgga
ttgattcatagtatcagacatgaatatgtggcggcattggatagttatatgaaagatgca
gatgagcctgttcatgctttctcctttattaacagagcattctcacagttgactgacaat
gatcatgcagcttttcggtcagcagtcatatttcgaattcctgagttggttgaactaagc
agggagggcgcattccatatggttatcagtcattttagcaatgaaagttcccgtatcata
actgatcttcactgtcatccaagaagtcttttcctttatttaaagacactcattgagctt
catttatttggcaccctagacctgtctaatttgagaaaagatggtactatgaatcccctt
aatggaaggcaggttaaggatcacccacaaggagtcagagattacttagagaatatatct
aatttccccaagtacatgcgtgaaaatcctattcgagttcctgatgatcttattgagctt
taccttgagttattatgcaagtatgaaggtggttcagttctcaagtttctggaaatgttt
gatagctatcgagttgaacattgtttacgcctgtgccaagaatatggcattatagatgca
tctgcgttcttattagaaagggttggtgatgttggtagtgctctttcacttacactttct
gatctatatgataaatttgttgagcttgataccgctgtggaagctgtagttttaaaccat
cgcagagttggttcttcacatatggaagtattcaacagtgttttgaaaacaaaggaggta
agtgacatccacaatttattgcgtgcctgtattggtctgtgtcagcggaacacccctcgt
ctaaatcctgaggagtcagaggcacattggtttaaattacttgactcgttttgtgatcca
ttgatggattcaaatgttgaagagagagcatatgaaagtaagagttattttggaatgcta
gctggatcagcagattcacaacaggacaaagacacccataaaagcagttggaaaatttca
aagtcctggactggtcatatcttgaaaaaattgctatcccagttcattaaagagattgtt
gagggaatgatcggttttgttcaccttccaactatcatgtctaaactcctgtctgataat
ggtagtcaagaatttggtgattttaaacttacaatattgggaatgctgggaacatatggc
tttgaaagaagaattctggatgctgccaaatcattaatagaggatgattctttttatact
atgagtttactcaaaaaaggggcctcccatggatacgctcccaggagtctcgtgtgctgt
gtttgtaattgccctcttacaaagaactctgttagctctggaattcggattttcaactgt
ggccatgcaattcatctccaatgtgaagtttcggaaattgagggatcgagcaaaacatct
tcatctggatgccctgtatgccctgtatgcatgcccaaccagaaatcccagcagtctaga
aacaaatcaatcattgcagcaaatggcttggtcaataaattctcatcaaggcctcaatac
ccccatggaagttccattcatcctcatgacagtgatttatcagataatatgtatggacaa
caacagatatcacggttcgagatcttgagcagcttgcagaagaatcggagatttatgcaa
atagaaaacttgcctccattgaagcttgccccacctgctgtgtaccatgaaaaggtaagt
aaagtggcaaactttctgactggcgaaagtagcaatagttccagtgctattgagaaacaa
agtagaagcaagcaaaatcgggagctgagagttaagggttcatcaattcgatttccttta
aaatcaagcatatttggcaaggagaagaccaataagcggtga
DBGET
integrated database retrieval system
