Glycine max (soybean): 100780946
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Entry
100780946 CDS
T01710
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100780946
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmx04812
]
100780946
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
100780946
Membrane trafficking [BR:
gmx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100780946
Cytoskeleton proteins [BR:
gmx04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
100780946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
Vps4_C
AAA_22
NPHP3_N
AAA_16
Mg_chelatase
AAA_14
DUF815
AAA_25
AAA_2
TIP49
IstB_IS21
RNA_helicase
nSTAND3
TniB
AAA_24
MCM
AAA_21
MIT
NACHT
Motif
Other DBs
NCBI-GeneID:
100780946
NCBI-ProteinID:
XP_003552348
UniProt:
I1N3G3
LinkDB
All DBs
Position
18:complement(51215016..51222414)
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AA seq
491 aa
AA seq
DB search
MSFLQGIVDSFNSIFIPDNNNYHDTNSPSSSSSSTNRMEASPPPPPLPPSVSNERVAYKL
KGYFDLATQEIAKGVRAEEWGLIDDALLHYRNAHSILLEANSTPVPSYITSSEQQKVQSY
REKISKWQSQVSERLQTLARRAGSSSANQSTSKLAQTVAVPIKPSSTRKNVLQKPPQRTG
QVNKVGSPKSSQGSGVNYDDKLVEMINTAIVDRSPSVRWEDVAGLEKAKQALMEMVILPT
KRRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESQATFFNVTAASLTSKWVGEGEKL
VRTLFMVAISRQPSVIFIDEIDSIMSTRLANENDASRRLKSEFLIQFDGVTSNPDDIVIV
IGATNKPQELDDAVLRRLVKRIYIPLPDENVRKLLLKHKLKGQAFSLPSRDLERLVKETE
GYSGSDLQALCEEAAMMPIRELGADILTVKANQVRGLRYEDFKKAMATIRPSLNKSKWEE
LERWNEDFGSN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcctgcagggtatcgttgattccttcaactccatcttcatacccgataacaac
aattatcacgacaccaattctccttcttcttcttcttcctcaacgaatcgaatggaagct
tctcctcctcctcctcctcttcctccttcggtttcgaacgagcgcgttgcctacaagctc
aaaggctacttcgatttggcgacgcaggagatcgcgaagggcgttagggcagaggaatgg
ggcttgatcgacgatgcgcttctccactaccgtaacgcgcactcgatcctcctcgaagct
aattcaactcccgttccgtcctacatcacttccagtgaacagcagaaggtgcaatcttat
cgagagaagatatccaaatggcagagtcaggtttctgagagattgcagactctcgctaga
cgagctggtagctcatctgctaatcagagcacctcaaaacttgcccaaactgtggcagtt
ccgattaagccatcgagtactagaaaaaatgtgttacaaaagccccctcaaagaacaggt
caggtgaataaagttggaagcccaaaatctagtcaagggtctggtgtaaattatgatgac
aaactagttgaaatgattaacactgccatagtagatagaagtccttctgttagatgggaa
gatgttgctgggcttgaaaaggcaaagcaagctttaatggaaatggttattttgccaact
aagagaagagacttgtttacgggtcttcgaaggccagccagaggtttgcttctctttggt
ccccctggtaatggaaaaacaatgcttgccaaagcagtggcttcagaatcacaagcaaca
ttttttaatgtcacagcagcttccttgacatcaaaatgggtgggtgaaggtgaaaagctt
gtccggacactattcatggtagctatatccagacagccatctgtaattttcattgatgag
attgatagtataatgtcaacaaggttggcaaatgagaatgatgccagcagacgattaaaa
tctgaatttcttatccagtttgatggggtgacctccaatcctgatgatattgtgattgta
attggtgcgacaaataagccacaagaattggatgatgcagttcttaggagactggtaaag
agaatatacatacctttaccagatgaaaatgttcggaagctactgctaaaacacaaactc
aagggtcaagcattctccttacctagtagagatctagagaggcttgtaaaggagaccgaa
ggatattctggcagtgatctacaagccttgtgtgaagaagccgcaatgatgcccattaga
gagctgggtgctgacattcttactgttaaggctaatcaggtaagaggactgaggtacgag
gattttaagaaggcaatggctaccattaggccaagcttaaacaaaagtaagtgggaagag
cttgagcgttggaatgaggattttggttctaattga
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