Glycine max (soybean): 100781026 Help Entry 100781026         CDS       T01710                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism gmx  Glycine max (soybean) Pathway gmx03040   Spliceosome Brite KEGG Orthology (KO) [BR:gmx00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     100781026  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gmx03019]     100781026    03041 Spliceosome [BR:gmx03041]     100781026 Messenger RNA biogenesis [BR:gmx03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      100781026 Spliceosome [BR:gmx03041]  Complex B   Other components    Prp19-related factors     100781026  Complex C     100781026 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 ARM_TT21 ARM_TT21_C NRDE-2 UTP6_C Motif Other DBs NCBI-GeneID:  100781026 NCBI-ProteinID:  XP_006594623 UniProt:  K7M1P8 LinkDB All DBs Position 13:complement(34870463..34875847) Genome browser AA seq 919 aa AA seqDB search MVIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY KLWHAYLRERLDLVRNLPVIHSQYDTLNNTFERALVTMHKMPRIWIMYLQTLTNQKLITR TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPSHIEDFIEFL LNSSLWQESSERLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGG IRKFTDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYSQFEESML AFKMEEMRLSDEEDGEEEGEENGVEEGDEEDIRFKGRLVEEDFERKILHGFWLNDKNDID LRLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTIDPM KAVGKPHTLWVAFAKLYEQHKDIANARVIFDKAVQVNYKTVDNLASVWCEWAEMELKYKN FKGALELMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGTLESTCA VYERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFV KRYGKNKLERARELFENAVESAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPN NEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELEKSLGEIDRA RGIFVFASQFADPRSDPEFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEY LMQKDQTVNLDEAKDKLKQAGIPEDEMAALERQLAPAVDNTVTKDRKVGFVSAGVESQLD RGVKTSANHEDIELPEESDSDDDDDKIEIAQKDVPSAVFGGLIRKRDENENNGEVDAAKD KDNGIRLGALERMKRLKQN NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atggtaattgcgcaagatttgtatccatcagaagacgaccttttgtacgaagaggagttg cttcgaaaccctttcagcctcaagctatggtggcgctacctgattgcgcgttcggaagct ccgttcaagaagcgcttcgtcatttacgagcgggcactcaaggcgcttcctggaagctac aagttgtggcacgcctacctccgcgagcgcctcgacctcgttcgcaatcttccggtgatt cactcacagtacgacacgctcaacaacaccttcgagcgcgccctcgtaacgatgcacaaa atgccgcgaatttggatcatgtacctgcaaaccctaacgaatcagaaattgatcactcgc acacgcaggaccttcgatagggctctatgcgcgctccctgttacccagcatgaccgcatt tgggaaccctatcttgtgtttgtgagccagaaaggtattcctattgagacttctcttcgg gtttatcgcaggtatttgaagtatgatccttctcacattgaggattttattgagtttttg cttaattcgagtctctggcaagagtcttctgagaggctggcttctgtgctcaatgatgac cagttttactcgattaagggtaagaccaagcaccggctttggttggagttgtgtgatttg ctcactcgccatgcgaatgaggtgtctgggttgaatgtggatgctatcattaggggtggg attaggaagttcactgatgaggtgggtaggctttggacttcgttggctgagtattacatt aggaggggcttacatgagaaggccagggatgtgtttgaggagggcatgtctactgttatt actgtcagggattttagtgttatatttgattcttactcgcagtttgaggagagcatgctt gctttcaagatggaggagatgaggctgagtgatgaagaggatggtgaggaggagggtgaa gagaacggtgttgaggaaggggatgaagaggatattcgttttaaaggaagattggtggag gaggattttgagaggaagattttacatgggttttggttgaatgacaagaatgacatagac ttgaggttggctcggtttgattaccttatggagaggaggcctgaattggctaacagtgtg cttttgcgtcaaaatcctcataatgtagaacagtggcaccggagggtgaagctctttgaa gggaatcctaccaagcagatactgacttacacggaagcggtgaggacaattgatcccatg aaggcagtgggaaagcctcatacattgtgggttgcttttgccaaactgtatgagcagcac aaagatatagccaatgcccgggtcatatttgacaaggcagtgcaggtgaactacaaaact gtggataatctggctagtgtctggtgtgagtgggctgaaatggagttgaagtataaaaat ttcaaaggagcacttgagctgatgaggcgggctacggcagagccatccgttgaggtcaag cgaagagtggctgctgatgggaatgaaccagtccagatgaaactgcataaatccttgaga ttgtggacattttatgttgatttggaggaaagcctaggtactttggagtctacatgtgct gtttatgagcggatcttggatttacgaatagccacgccgcaaataatcatcaattatgca tacttcctggaggaacataaatactttgaagatgcttttaaagtttatgaaagaggtgta aagatatttaagtacccacatgttaaagacatatgggttacatatctctctaaatttgtg aagagatatggaaagaataaattggagagagcaagagaactatttgaaaatgcagttgaa tcggccccagctgatcaagtgaaaccactttacctgcaatatgccaagctggaggaggac tatggactagcgaagcgagctatgaaggtttatgatcaagcaactaaggctgttcctaac aatgagaagttaagcatgtatgaaatatatattgctcgtgcagctgagatatttggtgta cccaaaacaagggagatctatgaacaggcaattgaatctggtcttccagacaaggatgtc aaaaccatgtgtttgaagtatgctgagttggaaaaaagtttgggagaaattgaccgggcc cgtggaatatttgtttttgcctctcagtttgcagatccacgatctgatccagaattttgg aataagtggcacgagtttgaggttcagcatgggaacgaagatactttcagagaaatgctt cgtattaagcgaagtgtctctgcaagctacagccagacacattttatactgcctgagtat ctgatgcagaaggatcaaactgtgaatcttgatgaggccaaagacaaactgaaacaggct ggaatccctgaggacgaaatggctgctttagaaagacaattagccccagcagttgacaat acagtgacaaaagataggaaggttgggtttgtgagtgctggagtggaatctcagcttgat agaggggtaaaaactagtgcaaatcatgaggatattgagttaccagaagaaagtgattct gatgatgatgatgataagattgaaattgcacaaaaagatgttccttctgctgtgtttggt ggtttgattagaaagagagatgagaatgaaaataatggagaagtagatgctgcaaaagat aaggataatggaatacggcttggtgctcttgagagaatgaagaggctaaaacaaaattaa

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