Glycine max (soybean): 100781089
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Entry
100781089 CDS
T01710
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
100781089
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
100781089
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
PapC_N
Motif
Other DBs
NCBI-GeneID:
100781089
NCBI-ProteinID:
XP_014623677
UniProt:
I1J4Y6
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Position
1:2098958..2106905
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AA seq
672 aa
AA seq
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MKVERVSIFQWWVRVAVQLSLILLGAFSDRVSSIRSVSTSPPVKLNTENPHQVVISNGIV
SLNLSKPEGHIIGIYNGINNLLEPKNKEDDRGYLDVVWNEPGKPGIFERIDGTHFSVIAA
NENIVEISFLRTWTASMKGSSVPMNIDKRYILRRGDYGFYSYAIFNRPSGLPAVEVYQIR
IVFKLDEARFHYMAISDTRQRNMPSMRDRLSGQSLAYPEAVLLTHASEPQFKGEVDDKYQ
YSSENKDNTVHGWITQDDSAPVGFWLITPSNEFRHAGPIKQDLTSHVGPTTLSMFVSTHY
AGKEVAMVFGEGETYKKVFGPVFVYLNSVPNKSQFRSLWSDAVEQLSNEVRRWPYDFVGS
KDFLPPNQRGTVTGRLLVLDGGKRAQPANNAYVGLALPGDAGSWQRESKGYQFWIQADKD
GHFLIQNIVPGDYNLYAWVPGFIGDYRYQTKITIKPGCNINLNSLVYNPPRNGPTLWEIG
IPDRSAAEFYIPDPNPKFTNRLFQNDSQDKFRQYGLWERYTELYPNHDLVYTVGVSDYHN
DWFYAQVTRSTPEKTFVPTTWQIQFQLKNIIMPGNYTLQVGLASANNARLEVRFNDQNAK
LPHFSTGLTGDDNAIARHGIHGLYRLYTIAVGSNHLVKGKNTIYLTQSKGIGPFMGLMYD
YVRLESPPIKST
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggaaagggtttcaatattccagtggtgggttagagtagctgtgcagctcagc
ttaatcttgcttggtgccttttctgatagagtctcatcaattagaagcgtttcgacgtct
cctccagtaaagctgaataccgaaaatcctcaccaggtggtgattagcaacggcatcgtt
tccctcaatttgtcaaagcccgagggccatatcattggaatatataatggaattaacaat
ttacttgagccaaaaaataaagaagacgatagagggtacttggacgtcgtttggaacgaa
ccaggaaaacctggcatatttgagagaatcgatgggacacatttctcagtcattgcagca
aacgagaatatagttgaaatttcatttttaagaacatggacagcttccatgaaaggctca
agtgtccctatgaacatagacaaaaggtatatattgcgaagaggtgattatgggttttat
tcatacgcaatatttaatcgaccttcaggattacctgcggtggaggtttatcaaattagg
attgttttcaaactcgacgaagccaggttccactacatggccatatctgatactaggcaa
aggaacatgccatctatgagagatagattatcgggtcaaagcctggcgtatcctgaagct
gttcttttaacccatgcatctgagccacaatttaagggagaggtggatgacaaataccaa
tactcgagtgagaacaaagataacactgttcatggctggattacccaggatgattcagca
cccgtgggcttctggttgataacacccagtaatgagttccgccatgctgggcccattaag
caagaccttacctctcatgttggcccaactactctttccatgtttgtgagcactcattat
gctggcaaggaggtagccatggtatttggtgaaggggagacatataaaaaggtttttggc
ccagtttttgtctaccttaactctgttcccaacaaatctcagtttcggtctctctggtca
gatgctgtagaacagttatcgaatgaagtaagaagatggccttatgatttcgttggatca
aaagatttccttccacccaatcaacgaggaacagtgacaggacgactactagtcctagat
gggggaaagagagctcaacctgctaacaatgcttatgttggtctagctttgccaggagat
gcaggatcatggcagagagaaagcaagggttatcaattctggattcaagctgacaaagat
ggacacttcttgattcaaaatattgttcctggggattacaacttgtatgcatgggttccg
ggttttattggagattatagatatcaaactaaaattaccatcaaaccaggatgcaacatc
aacttgaattcactggtttataaccctccaagaaatggtcctactctatgggaaattggg
atcccagatcgctcagctgcagaattctatataccagaccctaaccccaagttcacgaac
agattattccagaacgatagccaagacaagtttaggcaatacggcttgtgggaacgttac
actgaactatatccaaaccatgatctcgtttacactgttggtgtatctgactatcacaat
gactggttttatgctcaagttaccaggagcacaccagaaaagacattcgtgccaacgaca
tggcaaattcaattccaacttaaaaatatcataatgccaggaaattacacattacaagtg
gggttggcatccgccaataatgctagactggaggttaggttcaatgaccagaatgctaag
cttccccacttctcaacagggctaacaggcgatgacaatgccatagcaagacatggaatt
catggattgtataggttgtatactatagctgtaggcagcaatcatttggtgaaaggaaaa
aacaccatctatttgacacagtcaaaaggcataggtcctttcatgggacttatgtatgat
tatgtccgcttagaaagtccaccaattaaaagtacttga
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