| Entry |
|
| Symbol |
HDA18
|
| Name |
(RefSeq) histone deacetylase 2 isoform X2
|
| KO |
|
| Organism |
gmx Glycine max (soybean)
|
| Brite |
KEGG Orthology (KO) [BR:gmx00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:gmx03036]
100781276 (HDA18)
Enzymes [BR:gmx01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100781276 (HDA18)
Chromosome and associated proteins [BR:gmx03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class IV HDACs
100781276 (HDA18)
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
17:38380270..38386180
|
| AA seq |
348 aa
MSSSSANDAEALRRNRILSSKLYFDVSPSKVPLIYSASYDIEFLGIEKLHPFDSSKWGRI
CGFLVSFGILDKKCVVEPLEASKDDLLVVHSESYLNTLKQSSKVAMIVEVPPVALIPNCL
VQQKVLFPFRKQVGGTILAAKLAKERGWAINMGGGFHHCSAQKGGGFCAYADISLCIHFA
FVRLNISRVMIIDLDAHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVK
SGTVTEEYLQKLDEALEVAGHRFNPELVIYNAGTDILEGDPLGRLEISPEGITLRDEKVF
RFAREKNIPIVMLTSGGYMKSSAGVIADSIVNLSKKCLIETSGAPKST |
| NT seq |
1047 nt +upstreamnt +downstreamnt
atgtcgtcttcttccgccaacgatgccgaggctctccggcgcaaccgcatcctctccagc
aagctctacttcgacgtgtctccgtccaaggttccgctaatctactccgcgtcttacgac
atagagtttctcggcatagagaaactgcatccgtttgattcgtcgaagtggggacgcatt
tgtggattcctcgtttcgtttggtattcttgacaaaaaatgcgtcgttgagcctttggaa
gcttccaaggatgatcttctagtggtacactctgaatcgtatttgaataccctgaagcag
agttcaaaagttgctatgatagttgaggtccctcctgtggcattaattcccaattgtctt
gtgcaacaaaaagttctttttccattcaggaagcaggttggaggaactatattggctgcg
aaacttgcaaaggagagaggatgggccattaacatgggaggtggttttcatcactgttct
gcacaaaaagggggtggattctgtgcttacgcagatatttctctatgcatccactttgct
tttgttcggttgaatatatcaagggtgatgatcattgatcttgatgcacatcaaggaaac
ggtcatgaaatggacttcgcttatgatagccgagtctatatcctggatatgtacaatcct
ggaatatatcctttggattatgaggcgagaaactacataaatcagaaagttgaagtaaag
agtgggacagttacagaagagtacctgcaaaaattagatgaagcacttgaggttgctggg
cataggtttaaccctgagttggttatttataatgctggaactgacatcctagaaggtgat
ccattaggaaggttggagatcagtcctgaaggaattacccttagagatgagaaagttttc
cggtttgctcgtgaaaaaaacattcctatcgttatgctcacttcaggtggttacatgaag
tccagtgctggagtcattgcagattcaatagtcaatctctcgaagaaatgcttgatagaa
acgagtggagctccaaagtctacgtaa |