Glycine max (soybean): 100781364
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Entry
100781364 CDS
T01710
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03410
Base excision repair
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100781364
03410 Base excision repair
100781364
03420 Nucleotide excision repair
100781364
03430 Mismatch repair
100781364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
100781364
03036 Chromosome and associated proteins [BR:
gmx03036
]
100781364
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100781364
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100781364
DNA Replication Termination Factors
ELG1-RFC complex
100781364
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100781364
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100781364
Check point factors
HRAD17(Rad24)-RFC complex
100781364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
Mg_chelatase
Rad17
Viral_helicase1
RCF1-5-like_lid
RuvB_N
AAA_11
AAA_28
AAA_19
AAA_5
AAA_25
AAA_assoc_2
nSTAND3
AAA_30
DNAX_ATPase_lid
AAA_3
AAA_24
AAA_18
RNA_helicase
NTPase_1
ABC_tran
IstB_IS21
DNA_pol3_gamma3
bpMoxR
AAA_33
SLFN-g3_helicase
NPHP3_N
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
100781364
NCBI-ProteinID:
XP_003525721
UniProt:
I1K0C4
LinkDB
All DBs
Position
5:4473404..4476873
Genome browser
AA seq
331 aa
AA seq
DB search
MSSSSSSNAYDVPWVEKYRPSKVADIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTT
SILALAHELLGGPNCKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLTPGRHKIVILDEA
DSMTTGAQQALRRTMEIYSNTTRFALACNTSAKIIEPIQSRCAIVRFSRLSDQEILGRLM
VVVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFQFVNQANVFKVCDQPHPLHV
KNMVRNVIEGNFDEACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFA
HMRICDGVGSYLQLCGLLAKLSLVRETAKAV
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgtcatcatcaagcaacgcctacgacgtgccatgggtagaaaagtaccgtccc
agcaaggtcgccgacatcgtcggcaacgaggacgccgtctccaggctccaagtcatcgct
cgcgacggcaacatgcccaatctcattttatccggtcctcccggaaccggcaaaaccact
agcattctcgccctcgcgcacgagcttctcggaggaccaaattgcaaggaagctgttctc
gaactaaacgcttcggatgatagaggaattgatgttgtgaggaacaagatcaagatgttt
gctcagaagaaagtcacactgaccccggggaggcacaagatagtgatactggatgaagct
gatagcatgaccacaggggcacaacaagcattgagaaggacgatggagatatattcaaac
accactcggtttgcccttgcttgcaatacctcagctaagattattgagcccattcagagt
agatgtgccattgtgcgattttcacggttgtctgatcaagagatacttggtcgtctcatg
gttgtggttcaagctgagaaggttccctatgtccctgaaggacttgaagccatcattttc
acagctgacggtgatatgagacaggcattgaataacttgcaagcaacatacagtgggttc
caatttgttaaccaagcaaatgttttcaaggtttgtgaccagccacatccactgcatgtg
aagaatatggtgcgtaatgtgattgaagggaattttgatgaagcttgttcaggcctcaag
caactgtatgacttgggatattcccccacagatatcatcacgacactctttcgtataata
aaaaattatgatatggccgagtacctgaaattggaattcatgaaggaaactggttttgct
catatgagaatttgtgatggagttggttcttatcttcagttgtgtggtctattggctaag
ctttctctagttcgtgagacagctaaagctgtatga
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integrated database retrieval system
