Glycine max (soybean): 100781504
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Entry
100781504 CDS
T01710
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100781504
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100781504
Membrane trafficking [BR:
gmx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
100781504
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100781504
Exosomal proteins of bladder cancer cells
100781504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
BPL_LplA_LipB_2
Zn_ribbon_19
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
100781504
NCBI-ProteinID:
XP_003537852
UniProt:
I1LJ90
LinkDB
All DBs
Position
11:8625950..8631681
Genome browser
AA seq
1221 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
NSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEDPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVRVWDIGSLKRKAGPAADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILATHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYTKDRFLRFFEFSTQRETQVLTIRRPG
SSSLNQSPKTLSYSPTENAILLCSDVDGGSYELYCISKDGTKDSFGRGDTQDPKKGLGGS
AVFVARNRFAVLDKGSNQVCVKNLKNELVKKSALPIAADAIFYAGTGNLLCRSEDRVFIF
DLQQRIVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAW
DDNGIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIFCLGRDGKNKAITVDAT
EYIFKLSLLKKKYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALES
GNIQIAVASATAIDEKDHWYRLGVEALRQGNSGIVEYAYQRTKNFERLSFLYLITGNVEK
LSKMLKIAEVKNDVMGQFHNALYMGDIRERVKILENAGHLPLAYITASVHGLHDVAERLA
AELGDNAPSVPEGKVQSLLMPPLPVLCGGDWPLLRVMRGIFEGDFNNTDRDADDEEYEAA
DGDWVEELDMVDVDGLENGDVAAILDGVEVAEDDDEEGGWELEDLELPPEADTPKVSVSS
RSSVFVAPTPGMAVSQIWIQRSSLAADHVAAGNFDTAIRLLNRQLGIRNFAPLKSMFLDL
HTGSHSYLRAFSSAPVVSIAVERGWTESSSPNVRGPPALPFRLSQLDEKLKAGYKSTTAG
KFTDALRTFVNILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRREIKDNPARQ
QELAAYFTHCNLQTPHLRLALLNAMTVCYKAKNLSTAANFARRLLETNPTVENQAKTARQ
VLAAAEKNMTDALQLNYDFRNPFVICGATYVPIYRGQKDVACPYCTSRFVPSQAGQLCAV
CELSVVGADASGLLCSPSQIR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaaaagtaatagagtgaagggactgagtttccacagcaag
agaccctggatcctcgcgagtcttcacagtggcgtgatccaactatgggattaccgaatg
ggtactctcattgacagattcgatgagcatgatggtcctgtcagaggtgtccatttccat
aattcccagcccctgtttgtctctggaggggatgattacaagattaaggtttggaactat
aagatgcataggtgcttgttcactcttctaggacaccttgattatatccgtaccgtgcaa
tttcatcatgaggacccttggattgtgagtgccagtgatgatcagaccattcgcatttgg
aactggcagtcacgtacctgtatatctgttttaactgggcacaatcactatgttatgtgt
gcttcattccatccaaaagaggatattgttgtgtcagcctccctggatcaaactgttcgt
gtttgggatattggttctctcaaaaggaaggccgggcctgctgcagatgacatcctacga
ttgagtcaaatgaacacagatctttttggaggtgttgatgcagttgttaagtatgtattg
gaaggtcatgaccggggtgtcaactgggctgcttttcatcctacactgcctctgattgtc
tcaggagctgatgaccgacaagtgaaactttggaggatgaatgacaccaaggcatgggaa
gtggatactctgagaggacacatgaataatgtttcatgtgttatgttccatgccaaacag
gacatcattgtgtcaaattctgaggataaaagtattcgagtatgggatgccacaaagcgg
actggaattcaaactttccgcagagagcatgatcggttttggattcttgctacacatcct
gaaatgaatttgttggcagctggtcatgacagtggcatgatagtctttaagctggagaga
gaaagacccgcttttgcagttagtggtgattctttattctacacaaaagaccgattcttg
cgtttcttcgaattttcaactcagagagagactcaagtacttacaattcgacgacctgga
tcttcaagtctgaatcaaagtccaaagactctttcctacagccctactgaaaatgcaatt
ctactctgttcagacgtggatggcggatcttatgagttgtattgcatatccaaagatggt
acaaaggacagttttggtaggggtgatacacaagatccaaagaaaggtcttggaggatct
gcagtctttgtggctcggaataggtttgctgtgcttgacaaaggcagcaaccaagtctgt
gtaaaaaatctgaagaatgagcttgtcaaaaagagtgccctccctattgctgcagatgct
atattctatgctggaacaggcaacttgctatgtaggtcagaggatagggtttttatattt
gatctacagcagaggattgttctcggtgatcttcagaccccttttataaagtatgtagtc
tggtctaatgacatggaaagtgttgctcttctcagtaaacatgcgattgtcattgctagc
aagaagcttgtgcaccaatgcaccctccacgagactatccgagtaaaaagtggagcctgg
gatgacaatggcatttttatttacacaacattaaatcatataaaatactgtctccccaat
ggagatagtgggataattaaaacactggatgtcccaatttatattacaaaggttgttgga
aacaccatcttctgcctgggtcgggatgggaaaaacaaggctataactgttgatgcaaca
gaatatatctttaagctttccttgttgaagaaaaaatatgaccatgtaatgagcatgata
aggaattcacagctctgtgggcaggcaatgattgcttatctacaacagaaagggtttcct
gaagttgccctccattttgtgaaagatgagagaatccgattcaatttggctttggagagt
ggcaacattcaaattgcagttgcatcagcaacagcaattgatgaaaaagatcactggtat
cgactaggggttgaagctctccgtcaaggtaactctggtatagtagagtatgcataccaa
aggactaaaaattttgagagactgtcattcctttatctcattactggtaatgtggagaaa
ctttcaaaaatgttgaaaattgctgaagtgaagaatgatgtgatgggccagtttcacaat
gctctatatatgggtgacatcagagagcgtgttaagatcttggagaatgcaggacatttg
cctcttgcttacatcactgcatcagtccatgggctacatgatgttgctgaaaggcttgca
gctgaattgggggataatgctccatctgtgcctgagggaaaagtacaatctctcttgatg
ccaccactacctgtattgtgtggtggtgattggccccttcttagggtcatgcgaggaata
tttgaaggtgattttaacaatacagatcgagatgctgatgatgaagagtatgaggctgct
gatggtgattgggtcgaggagcttgacatggttgatgtagatgggttagaaaatggagat
gttgctgcaattttggatggtgtagaagtggcagaagatgatgacgaagaaggtggatgg
gagctggaagatttagagctgccccctgaagctgacacaccaaaagtttctgtcagttca
cgatcttcagtttttgtggccccaacacctgggatggcagttagccagatatggattcag
agatcatctcttgcagctgatcatgtagctgctggcaattttgatactgcaataagatta
ctgaacaggcaactcgggatacggaactttgcccccttgaaatccatgttcctagatcta
catactggcagtcattcctatctgcgtgccttttcatccgctccagttgtatcaattgct
gttgaaagaggttggactgagtcatctagtccaaatgtgagaggcccaccagcacttcct
ttcagattgtctcaattagatgaaaaactcaaagctggttacaagtcaacaactgctggg
aaatttactgatgctcttcgcacttttgtcaatattcttcataccattcctttgattgtt
gttgagtcaaggagggaggtcgatgaagtgaaagaattgattatcatagtgaaagagtat
gtcttgggtctgcagatggagctcaaaagaagggaaattaaggacaatccagcacgccag
caagagcttgcagcttatttcacccactgcaatcttcaaacacctcacttgaggctagct
ttgctgaatgccatgactgtctgctacaaggcaaagaacctttccacggctgcaaacttt
gccaggaggctacttgagaccaatcctactgttgaaaaccaagctaagacagcaaggcaa
gtgcttgcagctgcagaaaagaatatgacggatgccttacaattgaactatgatttccga
aacccatttgtaatttgtggagcaacctatgtgcccatttatcgtggacagaaggatgtc
gcttgcccctattgtacttcccgtttcgtgccaagccaggcgggccagctatgtgctgtg
tgtgagctttcggtggtaggggcggatgcttctgggttgctctgctctccttcccagatt
cgttga
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