Glycine max (soybean): 100781588
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Entry
100781588 CDS
T01710
Name
(RefSeq) THO complex subunit 5B isoform X2
KO
K13174
THO complex subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100781588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100781588
03041 Spliceosome [BR:
gmx03041
]
100781588
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100781588
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100781588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
FHIPEP
Sel_put
Motif
Other DBs
NCBI-GeneID:
100781588
NCBI-ProteinID:
XP_003545313
UniProt:
I1M8M9
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Position
14:complement(7148195..7151839)
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AA seq
499 aa
AA seq
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MEDGDTTEEAVVVPVSIGDEQPFPHSLSRHRDSEEESPHETLRDTKASIENIVAEILSLK
NQGKPKPLLTLRLRELLTQTFLHFVTLRQANRSILMEEERARTETERAKAPLELATHQLQ
NLTYEKSQFVKAIKACNDSKSKYPDIEVVSEEEFFRDAPQDMKDSVLSNHSEHNVVLKRL
NFELFQRKELCKLGDKLEQKRKTLLETIASRKKFLSSLPSLLKSLKKASLPVQNQLGVQH
TKKLKQHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIIGSVKDAQAFAHHQAHKETGI
FITVESPKLENDEPNEEDGQRQSKRPRRFQGKESLDQEGIFQIHPLTVNLHVYDDEISDL
ESAKLTTLKFEYLMQLNIICVGNKASNDGPENDILSNLFPDDTGLELPHQSAKLFVGDAI
MFNGDRTSRPYKWAQHLAGIDFLPEVAPLLLASRETSDSDEAAKGEEFITSLSQYRQQSR
LQTVLQKIRSGRKAQLALQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggcgatacgacggaggaggcggttgtcgttccggtctccatcggcgacgag
caaccgtttcctcattctttgtcacggcaccgcgattcggaggaggaatctccgcatgaa
acgttgcgtgacacgaaagcctcaatagagaacatcgtggccgagattctctctctgaag
aaccagggaaaacccaaaccactcctcactctccgactcagagagctcctcactcaaacg
ttccttcacttcgtcactctccgccaggcaaatcgctcgatcttgatggaggaggagcgt
gcgagaacggaaacggagcgtgcgaaggcgcctctggaactcgccacacaccagcttcag
aacctgacttacgagaagagtcaattcgtgaaagcgataaaggcgtgtaacgattccaag
tcgaagtatcctgatattgaagtggtgtcggaggaagagttttttcgcgatgcgccgcag
gatatgaaggattctgttttatccaatcacagtgagcataatgtcgttcttaagaggctc
aattttgagctgttccagcgcaaagagctttgcaaacttggtgacaaactggaacagaaa
aggaaaacccttctggagacaattgcaagccgaaagaagttcttatctagcctcccttca
cttctcaagtctcttaagaaagcatccttgccggtgcaaaatcaattaggagttcagcat
actaagaaactaaagcagcatcattctgcagagttgcttccaccacctctttatgtgatt
tactcacagctgttggctcaaaaggaggcgtttggagaatctattgatgtggagattata
ggaagtgtcaaagatgctcaagcttttgcccatcatcaagctcacaaggagactggcatt
ttcatcactgtggagagtcccaaattggaaaatgatgaacctaatgaagaagatggtcag
agacagagtaaaaggccaaggaggtttcaaggcaaggagagccttgaccaggaaggaata
tttcaaattcacccacttactgtcaatctccatgtgtatgatgacgagatttctgatctt
gagtctgcaaaactcactactctaaagtttgagtacttgatgcagttgaatattatatgt
gttggaaacaaagcatctaatgatggtcccgagaatgacatcttaagcaatttattccct
gatgacacaggtctcgagcttcctcaccagtcagctaagctctttgttggggatgctata
atgttcaatggtgatagaacttcacgtccttacaaatgggctcagcacttagcgggtatt
gatttcttgcctgaggtggctcccttgctgcttgctagccgtgaaacttcagacagtgat
gaagcagccaaaggtgaagaattcataactagtctttcacaatatcgccagcaaagccga
ttacagacagttctgcaaaaaattcgatcagggagaaaagctcagttggctcttcaataa
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