| Entry |
|
|---|
| Name |
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C
|
|---|
| KO |
|
|---|
| Organism |
gmx Glycine max (soybean)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:gmx00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gmx03019]
100781668
03041 Spliceosome [BR:gmx03041]
100781668
03036 Chromosome and associated proteins [BR:gmx03036]
100781668
Enzymes [BR:gmx01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100781668
Messenger RNA biogenesis [BR:gmx03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100781668
mRNA cycle factors
Common to processing body (P body) and stress granule
100781668
Spliceosome [BR:gmx03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100781668
Chromosome and associated proteins [BR:gmx03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100781668
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
18:106317..110747
|
|---|
| AA seq |
591 aa
MRTSWADLAANSASENAGTSNSTAPSRPVYVPPHLRNRGPSESLAPAPPSNNNNNVGSRW
GALPPRNGWGNRSGGWDRREVNPFGGQEDAAAEEELGGEEQQESTGINFDAYEDIPVETS
GENVPPAVNTFAEIDLGNALNQNIRRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKT
AAFCFPIISGIMRGQAQVLQRPPPRGVRTVYPLALVLSPTRELSMQIHEEARKFSYQTGV
RVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDM
GFEPQIRKIVEQMDMPPAAARQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLI
VQRVEYVQESDKRSHLMDLLHAQKANGVQGKQALTLVFVETKKGADALEHWLCRNNFPAT
TIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRI
GRTGRAGKKGLATAFFNDNNASLARALADLMQEANQEVPDWLSRFAARSSFGGGRNRRSG
GGRFGGRDFRREGSFSRGGSDYYSAGNNSSGYGTSGGYGGGYGPGVTSAWD |
|---|
| NT seq |
1776 nt +upstreamnt +downstreamnt
atgcgaacttcatgggctgatttggctgccaattcggcgtctgaaaatgcgggaacctct
aactccacagctccttcgcggccggtttatgtgcctccgcatctgaggaaccgtggacca
tcagaatcccttgctccagcacctccatccaataataataataatgtgggatcacggtgg
ggtgctctgccacccagaaacggatgggggaacagaagtggtggttgggatcggcgcgaa
gtgaatcccttcggaggtcaggaggatgcagcagcagaagaggagttgggaggcgaggag
cagcaggagagcacgggaattaactttgatgcgtatgaggacattccggtggagacgagc
ggtgaaaacgtgcccccggctgtgaatacttttgcggagattgacttaggcaacgcgctt
aatcagaacattagacgctgcaaatatgtgaagccaacgccggttcagcggcatgccata
ccgatatcccttgcggggcgggatttgatggcttgtgcgcagactggttctggaaagact
gccgcattctgtttcccaatcatcagtgggattatgagaggccaagcccaagtcctccag
aggccgcctcctcgcggtgtccgcacagtctacccacttgcccttgttctctcacctact
agggagctatccatgcagatacatgaagaggctaggaaattttcttaccagactggggtt
agggtcgttgttgcttatggtggagctccgataaaccaacagctccgggaacttgagaga
ggggtggatatccttgttgcaactccgggaagactggtagatttactggagagagctaga
gtttcattgcaaatgattaggtatttggccttagacgaggcagatagaatgctggatatg
ggttttgagccacaaataaggaagattgtagaacaaatggacatgcctccagcagctgcc
agacagactatgctgttcagtgccacatttccaaaagagatacagagacttgcctccgat
ttcctttcaaattatatttttctggctgttggaagagtgggctcaagtactgatttaatt
gtccaaagagttgagtatgttcaagagtctgacaagagaagtcacctcatggatcttctt
catgcacagaaggcaaatggtgtacaaggaaagcaagctttgactttagtttttgtggag
acaaagaagggagctgatgctctagagcactggttgtgccgtaataattttccagcaact
actattcatggtgacaggacacaacaggaaagagaattggcattaaggtcatttaaaagt
ggcaacacccccatattggttgcaactgatgtggctgcacgtggtcttgatattcctcat
gttgcccatgtggttaactttgaccttcctaatgatattgatgattatgtacaccgaatt
ggaaggacagggcgggcaggaaagaaaggccttgcaactgcgttctttaatgacaacaat
gcatccctggcaagggccttagcagatctgatgcaagaagcaaatcaagaagtacctgat
tggctctcacggtttgctgctcgctcttcctttggtgggggaaggaaccgtcgatcagga
ggaggccgttttggtggccgtgactttcgaagagagggttcttttagtaggggtggttct
gattactacagtgcaggaaacaacagtagtggatatggcacttctggtgggtatggtgga
ggatatggtcctggggtaaccagtgcatgggattga |
|---|
