Glycine max (soybean): 100781711
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Entry
100781711 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100781711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100781711
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100781711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
FapA
DUF6306
Motif
Other DBs
NCBI-GeneID:
100781711
NCBI-ProteinID:
XP_003539122
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Position
11:12273955..12295344
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AA seq
761 aa
AA seq
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MSGFSFGSSSSQSSAFSFTNPSSSSSSPFSLSSTPAFSFGSSSLFTTNPTSAASSSPSPL
TFSFASSASPAPASAAAAASSIFGAATSASPLFSSPATAPSGASSSSAMTPSFGAAASSA
AASPFGGGTPSAKTTPFGAAASSVSTNLFGAGSSASTTLFGGVSSASTTPFGGAPSASLT
AFGGTPSAPTAPFGTASSTPTTTTSTTLFGGASSASATPFGVASSASTTPSGAASSASTT
PFGAPSSASLTAFAGTSSSSTLFGFSGTASATTPFGGSSSSSSTASASDSSSAFGASSSA
ATTPFGALNASSSAANSSPLFSGAFANTGASSSAASTTSFSGFAKPSTPAATTALSSSSG
LSLASQPSFGFPNAASASASSAASTASGTPAASRPSSGSTFSFTTSSAPLFSTVTTTTTA
STVSTGSTTLAPSVPAFGATGAASSAAASASATPVASTGAASSAASGGSSFTGFGVGSTA
TTASFGTGFSFSNKSSTVAVSSVTASAFGVSTSTSTAPAILSSSSSATPTSSALVVASTS
ETTSTVSTSVAAAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILNN
RDVLLRLEIEVAKVVETQSNLERQLELIETHQQEVDKALQSMEEEAECIYKDERGLLHDD
EAASTRDAMYEQSELIERELEQMTEQIKSVIQSLNSNQGGEHDTLDGMTPLDAVVRILNN
QLTSLMWIDEKAEEFSSRIQKLANPGSATDRELTGLGIWMS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttctccttcggatcttcttcttcccaatcttctgcattctccttcacaaac
ccttcttcttcttcttcttccccgttctcacttagctccacccccgctttctcatttgga
tcctcctctctcttcaccacaaaccctacctccgccgcgtcttcttcgccctcccctctc
actttctccttcgcttcctctgcctctcccgcacccgcatccgccgccgccgccgcttct
tcaatcttcggtgccgccacttctgcctcccccttgttctcttctcccgcaacggcgccg
tctggggcttcttcctcgtccgcaatgacgccgtcgtttggagcagcagcttcctccgcc
gcggcgtcgcctttcggtggcggaacgccctctgccaaaacgacgccgtttggagcagca
gcatcctcggtttcaactaatctgtttggagcagggtcctctgcttccactactctattt
ggtggagtatcctctgcttcaacgacgccgtttggcggagcgccctcagcttcattaacg
gcgtttggtggaacgccctcagctcctacggcgccgtttggcacagcttcctcaacgcca
acaacaactacatccacgactctgttcggaggagcgtcttctgcttcagcgacgccgttt
ggagtagcgtcctcagcttcaacgacgccgtctggtgcagcgtcttcagcttcaacgacg
ccgtttggtgcaccgtcgtctgcttcattaacggcgtttgctggaacgtcatcttcatcg
acactattcggattcagcggaacagcttctgcaacgacgccgtttggtggtagtagtagt
agtagtagtactgcctctgcctctgactcaagttcagcttttggagcatcttcttcagcc
gcaacgacgccgtttggagcgttgaatgcttcttcttcagctgcaaatagctctcctttg
ttctcaggtgcatttgctaataccggagcttcttcgtccgcggcctcaacgacgtcgttt
tcagggtttgcaaagccgtctactcctgccgctacaacggcgttgtctagctcttcagga
ctctccctcgcttctcaaccctcttttggatttcccaatgcagcttcggcttcggcttct
tcagctgcttccacagcttctggtacaccggcggcttcgaggccctcttcgggttcaact
ttttcgttcaccacgtcttcggcgccgctgttctcgacggtgacgaccaccaccaccgcc
tccaccgtgtctaccggcagcacgaccttggcgccttctgtgcctgcatttggtgctact
ggtgctgcatcttctgctgccgcgagtgcttccgcaactcctgttgcttctactggtgct
gcatcttctgctgccagtggaggatcgtcttttacaggatttggcgttggaagcacagcg
accactgcttcttttgggactgggttttccttttcgaataagtcgtcaacggtggcagtt
tctagtgttaccgcttctgcatttggggtgagcacttcaacctctactgctccagcaatt
ttgagttccagctctagtgcaactccgacatcatccgctcttgttgtggcttccactagt
gaaactacttcaactgtcagcacttcagttgctgctgcaccaaaattgccttctgaaatc
acagggaagacggtggaggagattatcaaggagtggaatgctgagttgcaagagcgaact
ggaaaatttagaaaacaagcaaatgcaatagctgaatgggatcgcaggattttgaacaat
cgtgatgttttattgagacttgagattgaagtggcaaaagtagttgagacacagtcaaat
ttggagaggcaattggagttgatagagactcatcaacaggaggttgataaggctttacaa
agtatggaggaagaagcggagtgtatttacaaggatgagcgtggattacttcatgatgat
gaagctgcatctacaagagatgcaatgtatgagcaatctgaattgattgaaagggaactt
gagcagatgactgaacaaatcaaatcagttatccaatcccttaattcaaaccagggtgga
gaacatgatacccttgatggaatgactccattagatgcagtagttcgaattctaaataat
caactaacttctctgatgtggattgatgaaaaggctgaagaattttcttcccgtattcag
aagctagctaacccaggttctgctacagatcgtgaactgacgggtctaggaatctggatg
tcctga
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