Glycine max (soybean): 100781973
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Entry
100781973 CDS
T01710
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gmx
Glycine max (soybean)
Pathway
gmx04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
100781973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmx04040
]
100781973
Ion channels [BR:
gmx04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
100781973
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Motif
Pfam:
Ion_trans
cNMP_binding
Cupin_2
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
100781973
NCBI-ProteinID:
XP_003548317
UniProt:
I1MQM1
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Position
16:complement(37786611..37795482)
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AA seq
766 aa
AA seq
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MANLENDKLPMLSDIDAQPYDEPLDSKFKRTVTRTHSASVSISMSSLESYEKETSLVGHT
GPLQSKRKTPFMQMSGPLYATTGTGNLLQKHIVSGNKAKERTTDNFATHHDTGSNYWNND
YDRKNEHLLKSGQLGMCNDPYCTTCPTYFNASQQRNPKPSTRWDPKFHNALYGDAKSFVR
KLLSFCYSYVPGVMNPHAKVVQKWNKCLAIFCLIAIFVDPLFFFLLYVEKDNKCIVINWP
LTTALVLFRCVNDFVYFLNILLQFRLAYVSRESRVVGAGDLVDHPKKIALHYLKGYFLID
LFVVFPLPQIMILFVLPNSLEGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPMGFIFE
SAWANFVINLLIFVLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPECMKFIDCGRGHGN
NQPGLRSDQWINNTQAVACLDPSPDGFSYGIYENAVPLTIETNVVKKYVYSLFWGFQQIS
TLAGNLEPSYFVWEVLFTMAIIGMGLLLFAILIGNIQNFLQALGRRKLEMQLRGRDVEQW
MSHRRLPEDLRRRVRRAERYNWAATRGVNEEMLMENLPEDLQRDIRRHLFKFVKKIRLFA
LMDEPILDAICERLRQKTYIKGSKILSQGGLVEKMVFVVRGKLESIGEDGTRIPLSEGDS
CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTR
FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttagaaaatgacaagctgccgatgctgtcagatatagatgcacaaccatat
gatgaacccttggactctaaattcaaaaggacagtaaccaggacacatagcgcatcagtt
tctatttctatgagttccttggagtcatatgagaaagaaactagccttgtaggacatact
ggtccacttcagagcaagaggaaaacaccctttatgcagatgagtggtccattgtatgct
accactggaactggaaatcttctgcagaagcatattgtatcaggaaacaaagcaaaggaa
agaacaacagataattttgctacacaccatgacacaggttcaaattactggaataacgac
tatgatagaaaaaatgaacacttactaaagtctgggcaactgggaatgtgcaatgatcct
tattgtactacttgccctacttacttcaacgcttctcagcagagaaatccaaaaccttca
actagatgggatccaaagttccataatgctctttatggggatgccaagagttttgtcaga
aaacttctttctttctgctattcgtatgttcctggagttatgaaccctcatgctaaagtt
gtacaaaaatggaacaaatgtttggccattttttgcttgattgctatttttgtggaccca
ctatttttcttcttactctatgtggagaaggataataaatgtattgttatcaactggcct
ttgacaacagcacttgttttatttagatgcgtgaatgattttgtttatttccttaacatt
cttctccagtttaggttagcttatgtttctcgtgaatcgagggtggttggtgctggagat
ttggttgaccatccaaagaagattgctcttcattacctaaagggttatttccttattgac
ttatttgttgtatttcctcttcctcagataatgatattgtttgtcctaccaaattccttg
gagggagcaaattatgccaagaatcttctgcgtgcagcaatcttagtgcaatatatcccc
aagttgttcaggtttctgccactgctaattggccaatctccaatgggattcatatttgag
tcagcctgggcaaatttcgtcataaaccttctcatttttgtgcttgctagtcatgttgtt
ggctcttgctggtacctcttcggtcttcagagggttaatcagtgtttgcgggatgcctgc
catagttctaatatacctgaatgcatgaagttcattgattgtggacgtggccatggaaac
aatcagcctggcttaagatcagatcagtggatcaacaatacccaagctgtcgcttgtttg
gatccctctcctgatggtttctcttacggaatttatgagaatgctgtaccacttactata
gaaactaatgttgtcaagaaatacgtgtattctcttttttggggattccagcaaatcagt
actctagctggtaatctagaacctagctattttgtgtgggaagtcctttttactatggcc
atcataggaatgggactcttgctttttgcaattcttattggaaacatacagaactttctg
caggctcttggacggaggaagctggaaatgcaacttagaggccgggatgttgagcaatgg
atgagccatcggcgcttaccagaagatctaagaaggagagtaagacgggctgaacgatac
aattgggctgcaacaaggggggtgaatgaagaaatgcttatggagaatttgccagaagat
ctccagagagacataagacgtcatctcttcaaatttgttaagaaaattcggctttttgct
ctgatggatgaacctatcttagatgccatttgtgagagactaagacaaaagacatacatc
aaaggaagtaaaattctaagtcagggtggtctagtagagaagatggtattcgtggtgcgt
ggcaaattggaaagcattggagaagatggaactagaattcctctatctgaaggggattct
tgtggtgaagagcttctgacatggtatcttgaacattcttcagttagcacagatggtaga
aaagtaagacttccaggacagagattggttagcaacaggacagtaaggtgcttaacaaat
gtggagtcattttcactctctgcttcagacattgaagaagttacaatccttttcacaaga
ttcttgcggagtccatgcgttcaaggagccctaaggtacgagtcaccttattggagatcc
cttgctgcgacccgcattcaagttgcttggagatacaggaagaaacgtctaagtcgtgtt
aattcctcaccgtcagattaa
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